Frontiers and techniques in plant gene regulation
Understanding plant gene regulation has been a priority for generations of plant scientists.
However, due to its complex nature, the regulatory code governing plant gene expression …
However, due to its complex nature, the regulatory code governing plant gene expression …
Enhancers in Plant Development, Adaptation, and Evolution
Understanding plant responses to developmental and environmental cues is crucial for
studying morphological divergence and local adaptation. Gene expression changes …
studying morphological divergence and local adaptation. Gene expression changes …
Deep learning‐enabled discovery and characterization of HKT genes in Spartina alterniflora
M Yang, S Chen, Z Huang, S Gao, T Yu, T Du… - The Plant …, 2023 - Wiley Online Library
Spartina alterniflora is a halophyte that can survive in high‐salinity environments, and it is
phylogenetically close to important cereal crops, such as maize and rice. It is of scientific …
phylogenetically close to important cereal crops, such as maize and rice. It is of scientific …
PTFSpot: deep co-learning on transcription factors and their binding regions attains impeccable universality in plants
S Gupta, V Kesarwani, U Bhati, Jyoti… - Briefings in …, 2024 - academic.oup.com
Unlike animals, variability in transcription factors (TFs) and their binding regions (TFBRs)
across the plants species is a major problem that most of the existing TFBR finding software …
across the plants species is a major problem that most of the existing TFBR finding software …
TSPTFBS 2.0: trans-species prediction of transcription factor binding sites and identification of their core motifs in plants
H Cheng, L Liu, Y Zhou, K Deng, Y Ge… - Frontiers in Plant …, 2023 - frontiersin.org
Introduction An emerging approach using promoter tiling deletion via genome editing is
beginning to become popular in plants. Identifying the precise positions of core motifs within …
beginning to become popular in plants. Identifying the precise positions of core motifs within …
The bHLH transcription factor OsPRI1 activates the Setaria viridis PEPC1 promoter in rice
P Carvalho, C Gomes, I Gonçalves… - New …, 2024 - Wiley Online Library
Photosynthetic efficiency is reduced by the dual role of Rubisco, which acts either as a
carboxylase or as an oxygenase, the latter leading to photorespiration. C4 photosynthesis …
carboxylase or as an oxygenase, the latter leading to photorespiration. C4 photosynthesis …
[HTML][HTML] Comprehensive analysis of computational approaches in plant transcription factors binding regions discovery
Transcription factors (TFs) are regulatory proteins which bind to a specific DNA region
known as the transcription factor binding regions (TFBRs) to regulate the rate of transcription …
known as the transcription factor binding regions (TFBRs) to regulate the rate of transcription …
Comprehensive evaluation of plant transcription factors binding sites discovery tools
Transcription factors (TFs) are regulatory proteins that bind to a specific DNA sequence,
known as the transcription factor binding site (TFBS), to regulate the rate of transcription …
known as the transcription factor binding site (TFBS), to regulate the rate of transcription …
Deep co-learning on transcription factors and their binding regions attains impeccable universality in plants
Unlike animals, variability in transcription factors (TF) and their binding sites (TFBS) across
the plants species is a major problem which most of the existing TFBS finding software fail to …
the plants species is a major problem which most of the existing TFBS finding software fail to …