Correlation and association analyses in microbiome study integrating multiomics in health and disease
Y Xia - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …
research fields, including microbiome and integrative multiomics studies. Correlation and …
Application of machine learning in microbiology
Microorganisms are ubiquitous and closely related to people's daily lives. Since they were
first discovered in the 19th century, researchers have shown great interest in …
first discovered in the 19th century, researchers have shown great interest in …
Breastmilk feeding practices are associated with the co-occurrence of bacteria in mothers' milk and the infant gut: the CHILD cohort study
Gut microbiota play a critical role in infant health. It is now accepted that breastmilk contains
live bacteria from endogenous and exogenous sources, but it remains unclear whether …
live bacteria from endogenous and exogenous sources, but it remains unclear whether …
Microbial network disturbances in relapsing refractory Crohn's disease
Inflammatory bowel diseases (IBD) can be broadly divided into Crohn's disease (CD) and
ulcerative colitis (UC) from their clinical phenotypes. Over 150 host susceptibility genes have …
ulcerative colitis (UC) from their clinical phenotypes. Over 150 host susceptibility genes have …
Microbiome multi-omics network analysis: statistical considerations, limitations, and opportunities
The advent of large-scale microbiome studies affords newfound analytical opportunities to
understand how these communities of microbes operate and relate to their environment …
understand how these communities of microbes operate and relate to their environment …
[HTML][HTML] From bag-of-genes to bag-of-genomes: metabolic modelling of communities in the era of metagenome-assembled genomes
Metagenomic sequencing of complete microbial communities has greatly enhanced our
understanding of the taxonomic composition of microbiotas. This has led to breakthrough …
understanding of the taxonomic composition of microbiotas. This has led to breakthrough …
Next generation microbiome research: identification of keystone species in the metabolic regulation of host-gut microbiota interplay
The community of the diverse microorganisms residing in the gastrointestinal tract, known as
the gut microbiota, is exceedingly being studied for its impact on health and disease. This …
the gut microbiota, is exceedingly being studied for its impact on health and disease. This …
Resolution and Cooccurrence Patterns of Gardnerella leopoldii, G. swidsinskii, G. piotii, and G. vaginalis within the Vaginal Microbiome
JE Hill, AYK Albert… - Infection and …, 2019 - Am Soc Microbiol
Gardnerella vaginalis is a hallmark of vaginal dysbiosis, but it is found in the microbiomes of
women with and without vaginal symptoms and those who do not have microbiologically …
women with and without vaginal symptoms and those who do not have microbiologically …
Revealing the role of Plant Growth Promoting Rhizobacteria in suppressive soils against Fusarium oxysporum f. sp. cubense based on metagenomic analysis
Fusarium oxysporum f. sp. cubense (Foc) is a soil-borne pathogen causing fusarium wilt
banana disease. Management of soil-borne disease generally required the application of …
banana disease. Management of soil-borne disease generally required the application of …
Characterization of the firm–firm public procurement co-bidding network from the State of Ceará (Brazil) municipalities
Fraud in public funding can have deleterious consequences for societies' economic, social,
and political well-being. Fraudulent activity associated with public procurement contracts …
and political well-being. Fraudulent activity associated with public procurement contracts …