Epigenetic regulation in neurodegenerative diseases

A Berson, R Nativio, SL Berger, NM Bonini - Trends in neurosciences, 2018 - cell.com
Mechanisms of epigenetic regulation, including DNA methylation, chromatin remodeling,
and histone post-translational modifications, are involved in multiple aspects of neuronal …

Mitochondrial iron metabolism and neurodegenerative diseases

R Cheng, VV Dhorajia, J Kim, Y Kim - Neurotoxicology, 2022 - Elsevier
Iron is a key element for mitochondrial function and homeostasis, which is also crucial for
maintaining the neuronal system, but too much iron promotes oxidative stress. A large body …

Single-nucleus transcriptome analysis reveals dysregulation of angiogenic endothelial cells and neuroprotective glia in Alzheimer's disease

SF Lau, H Cao, AKY Fu, NY Ip - Proceedings of the …, 2020 - National Acad Sciences
Alzheimer's disease (AD) is the most common form of dementia but has no effective
treatment. A comprehensive investigation of cell type-specific responses and cellular …

[HTML][HTML] Meta-analysis of the Alzheimer's disease human brain transcriptome and functional dissection in mouse models

YW Wan, R Al-Ouran, CG Mangleburg, TM Perumal… - Cell reports, 2020 - cell.com
We present a consensus atlas of the human brain transcriptome in Alzheimer's disease
(AD), based on meta-analysis of differential gene expression in 2,114 postmortem samples …

Sex-specific transcriptional signatures in human depression

B Labonté, O Engmann, I Purushothaman, C Menard… - Nature medicine, 2017 - nature.com
Major depressive disorder (MDD) is a leading cause of disease burden worldwide. While the
incidence, symptoms and treatment of MDD all point toward major sex differences, the …

Integrated proteomics reveals brain-based cerebrospinal fluid biomarkers in asymptomatic and symptomatic Alzheimer's disease

L Higginbotham, L Ping, EB Dammer, DM Duong… - Science …, 2020 - science.org
Alzheimer's disease (AD) lacks protein biomarkers reflective of its diverse underlying
pathophysiology, hindering diagnostic and therapeutic advancements. Here, we used …

[HTML][HTML] A multi-network approach identifies protein-specific co-expression in asymptomatic and symptomatic Alzheimer's disease

NT Seyfried, EB Dammer, V Swarup, D Nandakumar… - Cell systems, 2017 - cell.com
Here, we report proteomic analyses of 129 human cortical tissues to define changes
associated with the asymptomatic and symptomatic stages of Alzheimer's disease (AD) …

The niacin receptor HCAR2 modulates microglial response and limits disease progression in a mouse model of Alzheimer's disease

M Moutinho, SS Puntambekar, AP Tsai… - Science translational …, 2022 - science.org
Increased dietary intake of niacin has been correlated with reduced risk of Alzheimer's
disease (AD). Niacin serves as a high-affinity ligand for the receptor HCAR2 (GPR109A). In …

DGCA: a comprehensive R package for differential gene correlation analysis

AT McKenzie, I Katsyv, WM Song, M Wang… - BMC systems …, 2016 - Springer
Background Dissecting the regulatory relationships between genes is a critical step towards
building accurate predictive models of biological systems. A powerful approach towards this …

Prediction of Alzheimer's disease based on deep neural network by integrating gene expression and DNA methylation dataset

C Park, J Ha, S Park - Expert Systems with Applications, 2020 - Elsevier
Motivation The molecular mechanism of Alzheimer's disease (AD) has not been clearly
revealed and there is no clinically reliable genetic risk factor. Therefore, diagnosis of AD has …