[HTML][HTML] Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization

F Hu, AA Chen, H Horng, V Bashyam, C Davatzikos… - NeuroImage, 2023 - Elsevier
Magnetic resonance imaging and computed tomography from multiple batches (eg sites,
scanners, datasets, etc.) are increasingly used alongside complex downstream analyses to …

Artificial intelligence in the radiomic analysis of glioblastomas: A review, taxonomy, and perspective

M Zhu, S Li, Y Kuang, VB Hill, AB Heimberger… - Frontiers in …, 2022 - frontiersin.org
Radiological imaging techniques, including magnetic resonance imaging (MRI) and positron
emission tomography (PET), are the standard-of-care non-invasive diagnostic approaches …

Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration

A Klein, J Andersson, BA Ardekani, J Ashburner… - Neuroimage, 2009 - Elsevier
All fields of neuroscience that employ brain imaging need to communicate their results with
reference to anatomical regions. In particular, comparative morphometry and group analysis …

Robust brain extraction across datasets and comparison with publicly available methods

JE Iglesias, CY Liu, PM Thompson… - IEEE transactions on …, 2011 - ieeexplore.ieee.org
Automatic whole-brain extraction from magnetic resonance images (MRI), also known as
skull stripping, is a key component in most neuroimage pipelines. As the first element in the …

[HTML][HTML] Statistical normalization techniques for magnetic resonance imaging

RT Shinohara, EM Sweeney, J Goldsmith, N Shiee… - NeuroImage: Clinical, 2014 - Elsevier
While computed tomography and other imaging techniques are measured in absolute units
with physical meaning, magnetic resonance images are expressed in arbitrary units that are …

Fast and robust multi-atlas segmentation of brain magnetic resonance images

JMP Lötjönen, R Wolz, JR Koikkalainen, L Thurfjell… - Neuroimage, 2010 - Elsevier
We introduce an optimised pipeline for multi-atlas brain MRI segmentation. Both accuracy
and speed of segmentation are considered. We study different similarity measures used in …

Evaluating intensity normalization on MRIs of human brain with multiple sclerosis

M Shah, Y Xiao, N Subbanna, S Francis, DL Arnold… - Medical image …, 2011 - Elsevier
Intensity normalization is an important pre-processing step in the study and analysis of
Magnetic Resonance Images (MRI) of human brains. As most parametric supervised …

[HTML][HTML] A multi-scanner neuroimaging data harmonization using RAVEL and ComBat

ME Torbati, DS Minhas, G Ahmad, EE O'Connor… - Neuroimage, 2021 - Elsevier
Modern neuroimaging studies frequently combine data collected from multiple scanners and
experimental conditions. Such data often contain substantial technical variability associated …

MR intensity normalization methods impact sequence specific radiomics prognostic model performance in primary and recurrent high-grade glioma

P Salome, F Sforazzini, G Brugnara, A Kudak, M Dostal… - Cancers, 2023 - mdpi.com
Simple Summary As magnetic resonance (MR) intensities are acquired in arbitrary units,
scans from different scanners are not directly comparable; thus, intensity normalization is …

Fully automated and adaptive intensity normalization using statistical features for brain MR images

E Goceri - Celal Bayar University Journal of Science, 2018 - dergipark.org.tr
Accuracy of the results obtained by automated processing of brain magnetic resonance
images has vital importance for diagnosis and evaluation of a progressive disease during …