Generative machine learning for de novo drug discovery: A systematic review
DD Martinelli - Computers in Biology and Medicine, 2022 - Elsevier
Recent research on artificial intelligence indicates that machine learning algorithms can
auto-generate novel drug-like molecules. Generative models have revolutionized de novo …
auto-generate novel drug-like molecules. Generative models have revolutionized de novo …
Graph neural networks for automated de novo drug design
Highlights•GNN has attracted wide attention from the field of designing drug molecules.•The
applications of GNN in molecule scoring, molecule generation and optimization, and …
applications of GNN in molecule scoring, molecule generation and optimization, and …
Self-supervised learning: Generative or contrastive
Deep supervised learning has achieved great success in the last decade. However, its
defects of heavy dependence on manual labels and vulnerability to attacks have driven …
defects of heavy dependence on manual labels and vulnerability to attacks have driven …
Language models can learn complex molecular distributions
Deep generative models of molecules have grown immensely in popularity, trained on
relevant datasets, these models are used to search through chemical space. The …
relevant datasets, these models are used to search through chemical space. The …
Graphaf: a flow-based autoregressive model for molecular graph generation
Molecular graph generation is a fundamental problem for drug discovery and has been
attracting growing attention. The problem is challenging since it requires not only generating …
attracting growing attention. The problem is challenging since it requires not only generating …
Graphdf: A discrete flow model for molecular graph generation
We consider the problem of molecular graph generation using deep models. While graphs
are discrete, most existing methods use continuous latent variables, resulting in inaccurate …
are discrete, most existing methods use continuous latent variables, resulting in inaccurate …
Moflow: an invertible flow model for generating molecular graphs
Generating molecular graphs with desired chemical properties driven by deep graph
generative models provides a very promising way to accelerate drug discovery process …
generative models provides a very promising way to accelerate drug discovery process …
Generative deep learning for targeted compound design
In the past few years, de novo molecular design has increasingly been using generative
models from the emergent field of Deep Learning, proposing novel compounds that are …
models from the emergent field of Deep Learning, proposing novel compounds that are …
Graph networks for molecular design
R Mercado, T Rastemo, E Lindelöf… - Machine Learning …, 2021 - iopscience.iop.org
Deep learning methods applied to chemistry can be used to accelerate the discovery of new
molecules. This work introduces GraphINVENT, a platform developed for graph-based …
molecules. This work introduces GraphINVENT, a platform developed for graph-based …
A unified framework for deep symbolic regression
The last few years have witnessed a surge in methods for symbolic regression, from
advances in traditional evolutionary approaches to novel deep learning-based systems …
advances in traditional evolutionary approaches to novel deep learning-based systems …