All about the RNA: interferon-stimulated genes that interfere with viral RNA processes

E Yang, MMH Li - Frontiers in immunology, 2020 - frontiersin.org
Interferon (IFN) signaling induces the expression of a wide array of genes, collectively
referred to as IFN-stimulated genes (ISGs) that generally function to inhibit viral replication …

Restricting retrotransposons: a review

JL Goodier - Mobile DNA, 2016 - Springer
Retrotransposons have generated about 40% of the human genome. This review examines
the strategies the cell has evolved to coexist with these genomic “parasites”, focussing on …

PARP14 is a PARP with both ADP-ribosyl transferase and hydrolase activities

N Đukić, Ø Strømland, JD Elsborg, D Munnur, K Zhu… - Science …, 2023 - science.org
PARP14 is a mono–ADP-ribosyl transferase involved in the control of immunity,
transcription, and DNA replication stress management. However, little is known about the …

CG dinucleotide suppression enables antiviral defence targeting non-self RNA

MA Takata, D Gonçalves-Carneiro, TM Zang, SJ Soll… - Nature, 2017 - nature.com
Vertebrate genomes exhibit marked CG suppression—that is, lower than expected numbers
of 5′-CG-3′ dinucleotides. This feature is likely to be due to C-to-T mutations that have …

The impact of PARPs and ADP-ribosylation on inflammation and host–pathogen interactions

AR Fehr, SA Singh, CM Kerr, S Mukai… - Genes & …, 2020 - genesdev.cshlp.org
Poly-adenosine diphosphate-ribose polymerases (PARPs) promote ADP-ribosylation, a
highly conserved, fundamental posttranslational modification (PTM). PARP catalytic …

The SARS-CoV-2 RNA Interactome

S Lee, Y Lee, Y Choi, A Son, Y Park, KM Lee, J Kim… - Molecular Cell, 2021 - cell.com
SARS-CoV-2 is an RNA virus whose success as a pathogen relies on its abilities to
repurpose host RNA-binding proteins (RBPs) and to evade antiviral RBPs. To uncover the …

The coronavirus macrodomain is required to prevent PARP-mediated inhibition of virus replication and enhancement of IFN expression

ME Grunewald, Y Chen, C Kuny, T Maejima… - PLoS …, 2019 - journals.plos.org
ADP-ribosylation is a ubiquitous post-translational addition of either monomers or polymers
of ADP-ribose to target proteins by ADP-ribosyltransferases, usually by interferon-inducible …

Pan-ancestry exome-wide association analyses of COVID-19 outcomes in 586,157 individuals

JA Kosmicki, JE Horowitz, N Banerjee, R Lanche… - The American Journal of …, 2021 - cell.com
Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) causes coronavirus
disease 2019 (COVID-19), a respiratory illness that can result in hospitalization or death. We …

NAD+ in COVID-19 and viral infections

M Zheng, MB Schultz, DA Sinclair - Trends in Immunology, 2022 - cell.com
NAD+, as an emerging regulator of immune responses during viral infections, may be a
promising therapeutic target for coronavirus disease 2019 (COVID-19). In this Opinion, we …

Role of host-mediated post-translational modifications (PTMs) in RNA virus pathogenesis

R Kumar, D Mehta, N Mishra, D Nayak… - International Journal of …, 2020 - mdpi.com
Being opportunistic intracellular pathogens, viruses are dependent on the host for their
replication. They hijack host cellular machinery for their replication and survival by targeting …