[HTML][HTML] Biocatalysis

EL Bell, W Finnigan, SP France, AP Green… - Nature Reviews …, 2021 - nature.com
Biocatalysis has become an important aspect of modern organic synthesis, both in
academia and across the chemical and pharmaceutical industries. Its success has been …

Hot spots-making directed evolution easier

H Yu, S Ma, Y Li, PA Dalby - Biotechnology Advances, 2022 - Elsevier
Directed evolution has emerged as a powerful strategy to engineer various properties of
proteins. Traditional methods to construct libraries such as error-prone PCR and DNA …

Ancestral sequence reconstruction enhances gene mining efforts for industrial ene reductases by expanding enzyme panels with thermostable catalysts

J Livada, AM Vargas, CA Martinez, RD Lewis - ACS Catalysis, 2023 - ACS Publications
Ancestral sequence reconstruction (ASR) has been used to produce enzymes that exhibit
enhanced stability, activity, and promiscuity compared to wild-type (WT) enzymes. In this …

Ancestral sequence reconstruction produces thermally stable enzymes with mesophilic enzyme-like catalytic properties

R Furukawa, W Toma, K Yamazaki, S Akanuma - Scientific reports, 2020 - nature.com
Enzymes have high catalytic efficiency and low environmental impact, and are therefore
potentially useful tools for various industrial processes. Crucially, however, natural enzymes …

Bypassing evolutionary dead ends and switching the rate-limiting step of a human immunotherapeutic enzyme

J Blazeck, CS Karamitros, K Ford, C Somody… - Nature …, 2022 - nature.com
The Trp metabolite l-kynurenine (KYN) accumulates in numerous solid tumours and
mediates potent immunosuppression. Bacterial kynureninases (KYNases), which …

Ancestral reconstruction and the evolution of protein energy landscapes

LO Chisholm, KN Orlandi, SR Phillips… - Annual Review of …, 2023 - annualreviews.org
A protein's sequence determines its conformational energy landscape. This, in turn,
determines the protein's function. Understanding the evolution of new protein functions …

Exploiting enzyme evolution for computational protein design

GP Pinto, M Corbella, AO Demkiv… - Trends in Biochemical …, 2022 - cell.com
Recent years have seen an explosion of interest in understanding the physicochemical
parameters that shape enzyme evolution, as well as substantial advances in computational …

Efficient exploration of sequence space by sequence-guided protein engineering and design

BE Clifton, D Kozome, P Laurino - Biochemistry, 2022 - ACS Publications
The rapid growth of sequence databases over the past two decades means that protein
engineers faced with optimizing a protein for any given task will often have immediate …

[HTML][HTML] Cell-free metabolic engineering enables selective biotransformation of fatty acids to value-added chemicals

Y Liu, WQ Liu, S Huang, H Xu, H Lu, C Wu… - Metabolic Engineering …, 2023 - Elsevier
Fatty acid-derived products such as alkanes, fatty aldehydes, and fatty alcohols have many
applications in the chemical industry. These products are predominately produced from …

Biocatalytic carboxylate reduction–recent advances and new enzymes

M Winkler, JG Ling - ChemCatChem, 2022 - Wiley Online Library
Carboxylate reductases (CARs) are valuable catalysts for the selective one‐step reduction
of carboxylic acids to their corresponding aldehydes. In recent years, numerous new CARs …