Ultra-high-performance liquid chromatography high-resolution mass spectrometry variants for metabolomics research

L Perez de Souza, S Alseekh, F Scossa, AR Fernie - Nature Methods, 2021 - nature.com
Ultra-high-performance liquid chromatography high-resolution mass spectrometry (UHPLC–
HRMS) variants currently represent the best tools to tackle the challenges of complexity and …

Feature-based molecular networking in the GNPS analysis environment

LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer… - Nature …, 2020 - nature.com
Molecular networking has become a key method to visualize and annotate the chemical
space in non-targeted mass spectrometry data. We present feature-based molecular …

The application of ion mobility-mass spectrometry in untargeted metabolomics: From separation to identification

MD Luo, ZW Zhou, ZJ Zhu - Journal of Analysis and Testing, 2020 - Springer
Untargeted metabolomics aims to comprehensively profile metabolites as many as possible
in biological samples. Recently, ion mobility-mass spectrometry (IM-MS) has emerged as a …

Gastroprotective potential of red onion (Allium cepa L.) peel in ethanol-induced gastric injury in rats: involvement of Nrf2/HO-1 and HMGB-1/NF-κB trajectories

NB Ali, SSA Ibrahim, MA Alsherbiny, E Sheta… - Journal of …, 2024 - Elsevier
Ethnopharmacological relevance The utilization of plants with therapeutic properties in
traditional medicine has a longstanding practice. Among them, the well-known Allium cepa …

Rapid development of improved data-dependent acquisition strategies

V Davies, J Wandy, S Weidt, JJJ Van Der Hooft… - Analytical …, 2021 - ACS Publications
Tandem mass spectrometry (LC-MS/MS) is widely used to identify unknown ions in
untargeted metabolomics. Data-dependent acquisition (DDA) chooses which ions to …

Pharmacological and metabolomic profiles of Musa acuminata wastes as a new potential source of anti-ulcerative colitis agents

MA Mohammed, BMM Ibrahim, Y Abdel-Latif… - Scientific Reports, 2022 - nature.com
Musa acuminata (MA) is a popular fruit peels in the world. Non-food parts of the plant have
been investigated for their antioxidant and anti-ulcerative colitis activity. Metabolomic …

Genome-Wide Association Study of Glucosinolate Metabolites (mGWAS) in Brassica napus L.

Y Tang, G Zhang, X Jiang, S Shen, M Guan, Y Tang… - Plants, 2023 - mdpi.com
Glucosinolates (GSLs) are secondary plant metabolites that are enriched in rapeseed and
related Brassica species, and they play important roles in defense due to their anti-nutritive …

LiLA: lipid lung-based ATLAS built through a comprehensive workflow designed for an accurate lipid annotation

B Fernández Requena, S Nadeem, VP Reddy… - Communications …, 2024 - nature.com
Accurate lipid annotation is crucial for understanding the role of lipids in health and disease
and identifying therapeutic targets. However, annotating the wide variety of lipid species in …

DEIMoS: an open-source tool for processing high-dimensional mass spectrometry data

SM Colby, CH Chang, JL Bade, JR Nunez… - Analytical …, 2022 - ACS Publications
We present DEIMoS: Data Extraction for Integrated Multidimensional Spectrometry, a Python
application programming interface (API) and command-line tool for high-dimensional mass …

Comprehensive Tools of Alkaloid/Volatile Compounds–Metabolomics and DNA Profiles: Bioassay-Role-Guided Differentiation Process of Six Annona sp. Grown in …

MA Mohammed, N Elzefzafy, MF El-Khadragy… - Pharmaceuticals, 2024 - mdpi.com
Trees of the Annona species that grow in the tropics and subtropics contain compounds that
are highly valuable for pharmacological research and medication development and have …