[HTML][HTML] Homoeologous exchanges, segmental allopolyploidy, and polyploid genome evolution

AS Mason, JF Wendel - Frontiers in Genetics, 2020 - frontiersin.org
Polyploidy is a major force in plant evolution and speciation. In newly formed allopolyploids,
pairing between related chromosomes from different subgenomes (homoeologous …

Polyploidy and genome evolution in plants

PS Soltis, DB Marchant, Y Van de Peer… - Current opinion in …, 2015 - Elsevier
Plant genomes vary in size and complexity, fueled in part by processes of whole-genome
duplication (WGD; polyploidy) and subsequent genome evolution. Despite repeated …

Recent progress and challenges in population genetics of polyploid organisms: an overview of current state‐of‐the‐art molecular and statistical tools

F Dufresne, M Stift, R Vergilino, BK Mable - Molecular ecology, 2014 - Wiley Online Library
Despite the importance of polyploidy and the increasing availability of new genomic data,
there remain important gaps in our knowledge of polyploid population genetics. These gaps …

[HTML][HTML] Plant speciation through chromosome instability and ploidy change: cellular mechanisms, molecular factors and evolutionary relevance

N De Storme, A Mason - Current Plant Biology, 2014 - Elsevier
Plant speciation and diversification strongly rely on structural changes in the nuclear
genome, both at the whole ploidy and individual chromosome level. Phylogenetic …

Applications of next‐generation sequencing in plant biology

AN Egan, J Schlueter… - American journal of …, 2012 - Wiley Online Library
The last several years have seen revolutionary advances in DNA sequencing technologies
with the advent of next‐generation sequencing (NGS) techniques. NGS methods now allow …

Evolutionary consequences, constraints and potential of polyploidy in plants

H Weiss-Schneeweiss, K Emadzade, TS Jang… - … and genome research, 2013 - karger.com
Polyploidy, the possession of more than 2 complete genomes, is a major force in plant
evolution known to affect the genetic and genomic constitution and the phenotype of an …

Genome sequence of dwarf birch (Betula nana) and cross‐species RAD markers

N Wang, M Thomson, WJA Bodles… - Molecular …, 2013 - Wiley Online Library
New sequencing technologies allow development of genome‐wide markers for any genus
of ecological interest, including plant genera such as Betula (birch) that have previously …

Review of potato molecular markers to enhance trait selection

AP Ramakrishnan, CE Ritland… - American journal of …, 2015 - Springer
Noncommercial varieties of potatoes (Solanum tuberosum L.) harbor genetic potential for
improvements of disease resistance and abiotic stress tolerance in commercial potato …

Advances in integrating genomics and bioinformatics in the plant breeding pipeline

H Hu, A Scheben, D Edwards - Agriculture, 2018 - mdpi.com
With the global human population growing rapidly, agricultural production must increase to
meet crop demand. Improving crops through breeding is a sustainable approach to increase …

Deep reticulation and incomplete lineage sorting obscure the diploid phylogeny of rain-lilies and allies (Amaryllidaceae tribe Hippeastreae)

N García, RA Folk, AW Meerow, S Chamala… - Molecular Phylogenetics …, 2017 - Elsevier
Hybridization is a frequent and important force in plant evolution. Next-generation
sequencing (NGS) methods offer new possibilities for clade resolution and ambitious …