Macromolecular crowding, phase separation, and homeostasis in the orchestration of bacterial cellular functions

B Monterroso, W Margolin, AJ Boersma, G Rivas… - Chemical …, 2024 - ACS Publications
Macromolecular crowding affects the activity of proteins and functional macromolecular
complexes in all cells, including bacteria. Crowding, together with physicochemical …

Molecular crowding: the history and development of a scientific paradigm

C Alfano, Y Fichou, K Huber, M Weiss, E Spruijt… - Chemical …, 2024 - ACS Publications
It is now generally accepted that macromolecules do not act in isolation but “live” in a
crowded environment, that is, an environment populated by numerous different molecules …

DEAD-box ATPases as regulators of biomolecular condensates and membrane-less organelles

D Overwijn, M Hondele - Trends in Biochemical Sciences, 2023 - cell.com
RNA-dependent DEAD-box ATPases (DDXs) are emerging as major regulators of RNA-
containing membrane-less organelles (MLOs). On the one hand, oligomerizing DDXs can …

Advanced imaging techniques for studying protein phase separation in living cells and at single-molecule level

G Mekonnen, N Djaja, X Yuan, S Myong - Current Opinion in Chemical …, 2023 - Elsevier
Protein-protein and protein-RNA interactions are essential for cell function and survival.
These interactions facilitate the formation of ribonucleoprotein complexes and biomolecular …

Exploration and application of chemico-biology detection methods and patterns for factors inducing protein misfolding

X Gao, J Zhai, X He, W Ding, B Shen - TrAC Trends in Analytical Chemistry, 2024 - Elsevier
Protein misfolding and aggregation are the leading cause of many diseases, including
neuron degenerative diseases, cardiovascular diseases, and cancers. However, the …

[HTML][HTML] Cell wall damage increases macromolecular crowding effects in the Escherichia coli cytoplasm

T Pittas, W Zuo, AJ Boersma - Iscience, 2023 - cell.com
The intracellular milieu is crowded with biomacromolecules. Macromolecular crowding
changes the interactions, diffusion, and conformations of biomacromolecules. Changes in …

[HTML][HTML] Probing protein aggregation through spectroscopic insights and multimodal approaches: A comprehensive review for counteracting neurodegenerative …

S Bashir, A Aiman, AA Chaudhary, N Khan, IA Ahanger… - Heliyon, 2024 - cell.com
Aberrant accumulation of protein misfolding can cause aggregation and fibrillation and is
one of the primary characteristic features of neurodegenerative diseases. Because they are …

Self-association of a nucleoid-binding protein increases with macromolecular crowding in Escherichia coli

T Pittas, AJ Boersma - bioRxiv, 2023 - biorxiv.org
Many proteins self-associate to achieve function. Macromolecular crowding enhances
protein self-assembly in buffer experiments with added crowders, and crowding could …

Drugging Disordered Proteins by Conformational Selection to Inform Therapeutic Intervention

ZA Levine, BA Bogin - bioRxiv, 2024 - biorxiv.org
Drugging intrinsically disordered proteins (IDPs) has historically been a major challenge
due to their lack of stable binding sites, conformational heterogeneity, and rapid ability to self …

[图书][B] Protein Folding

GE Orellana, E Haglund - 2024 - books.google.com
Life as we know it would not exist if proteins did not fold into functional three-dimensional
structures, where α-helices, loops, and β-sheets act together to form active sites that drive a …