The intratumoral bacterial metataxonomic signature of hepatocellular carcinoma

JH Huang, J Wang, XQ Chai, ZC Li… - Microbiology …, 2022 - Am Soc Microbiol
Microbiota is implicated in hepatocellular carcinoma (HCC). The spectrum of intratumoral
microbiota associated with HCC progression remains elusive. Fluorescence in situ …

Patterns of gene content and co-occurrence constrain the evolutionary path toward animal association in candidate phyla radiation bacteria

AL Jaffe, AD Thomas, C He, R Keren… - MBio, 2021 - Am Soc Microbiol
ABSTRACT Candidate Phyla Radiation (CPR) bacteria are small, likely episymbiotic
organisms found across Earth's ecosystems. Despite their prevalence, the distribution of …

Characterization and genome analysis of a psychrophilic methanotroph representing a ubiquitous Methylobacter spp. cluster in boreal lake ecosystems

R Khanongnuch, R Mangayil, MM Svenning… - ISME …, 2022 - academic.oup.com
Lakes and ponds are considered as a major natural source of CH4 emissions, particularly
during the ice-free period in boreal ecosystems. Aerobic methane-oxidizing bacteria (MOB) …

Gallionellaceae pangenomic analysis reveals insight into phylogeny, metabolic flexibility, and iron oxidation mechanisms

RL Hoover, JL Keffer, SW Polson, CS Chan - Msystems, 2023 - Am Soc Microbiol
The iron-oxidizing Gallionellaceae drive a wide variety of biogeochemical cycles through
their metabolisms and biominerals. To better understand the environmental impacts of …

Conversion of methane to organic acids is a widely found trait among gammaproteobacterial methanotrophs of freshwater lake and pond ecosystems

R Khanongnuch, R Mangayil… - Microbiology spectrum, 2023 - Am Soc Microbiol
Aerobic gammaproteobacterial methanotrophs (gMOB) are key organisms controlling
methane fluxes at the oxic-anoxic interfaces of freshwater ecosystems. Under hypoxic …

Krumholzibacteriota and Deltaproteobacteria contain rare genetic potential to liberate carbon from monoaromatic compounds in subsurface coal seams

BC Campbell, P Greenfield, EP Barnhart, S Gong… - Mbio, 2024 - Am Soc Microbiol
Biogenic methane in subsurface coal seam environments is produced by diverse consortia
of microbes. Although this methane is useful for global energy security, it remains unclear …

Environmental predictors of electroactive bacterioplankton in small boreal lakes

CN Olmsted, R Ort, PQ Tran… - Environmental …, 2023 - Wiley Online Library
Extracellular electron transfer (EET) by electroactive bacteria in anoxic soils and sediments
is an intensively researched subject, but EET's function in planktonic ecology has been less …