From sequence to consequence: Deciphering the complex cis-regulatory landscape

GJ Dsilva, S Galande - Journal of Biosciences, 2024 - Springer
Cell type-specific expression of genes plays a pivotal role in the development and evolution
of multicellular organisms over millions of years. The majority of regulatory control resides …

Bridging-Induced Phase Separation and Loop Extrusion Drive Noise in Chromatin Transcription

M Chiang, C Battaglia, G Forte, CA Brackley… - arXiv preprint arXiv …, 2024 - arxiv.org
Transcriptional noise, or heterogeneity, is important in cellular development and in disease.
The molecular mechanisms driving it are, however, elusive and ill-understood. Here, we use …

Estrogen-induced chromatin looping changes identify a subset of functional regulatory elements

H Abewe, A Richey, JM Vahrenkamp… - bioRxiv, 2024 - biorxiv.org
Transcriptional enhancers can regulate individual or multiple genes through long-range
three-dimensional (3D) genome interactions, and these interactions are commonly altered in …