The roles of sexual selection and sexual conflict in shaping patterns of genome and transcriptome variation

NM Tosto, ER Beasley, BBM Wong, JE Mank… - Nature Ecology & …, 2023 - nature.com
Sexual dimorphism is one of the most prevalent, and often the most extreme, examples of
phenotypic variation within species, and arises primarily from genomic variation that is …

Fourth report on chicken genes and chromosomes 2022

J Smith, JM Alfieri, N Anthony, P Arensburger… - … and genome research, 2023 - karger.com
The chicken continues to hold its position as a leading model organism within many areas of
research, as well as being a major source of protein for human consumption. The First …

On the decoupling of evolutionary changes in mRNA and protein levels

D Jiang, AL Cope, J Zhang… - Molecular Biology and …, 2023 - academic.oup.com
Variation in gene expression across lineages is thought to explain much of the observed
phenotypic variation and adaptation. The protein is closer to the target of natural selection …

Unifying approaches from statistical genetics and phylogenetics for mapping phenotypes in structured populations

JG Schraiber, MD Edge, M Pennell - PLoS biology, 2024 - journals.plos.org
In both statistical genetics and phylogenetics, a major goal is to identify correlations between
genetic loci or other aspects of the phenotype or environment and a focal trait. In these 2 …

[PDF][PDF] Cagee: computational analysis of gene expression evolution

J Bertram, B Fulton, JP Tourigny… - Molecular Biology …, 2023 - academic.oup.com
Despite the increasing abundance of whole transcriptome data, few methods are available
to analyze global gene expression across phylogenies. Here, we present a new software …

Evolution of chemosensory tissues and cells across ecologically diverse Drosophilids

G Bontonou, B Saint-Leandre, T Kafle, T Baticle… - Nature …, 2024 - nature.com
Chemosensory tissues exhibit significant between-species variability, yet the evolution of
gene expression and cell types underlying this diversity remain poorly understood. To …

Sex-biased gene expression at single-cell resolution: cause and consequence of sexual dimorphism

I Darolti, JE Mank - Evolution Letters, 2023 - academic.oup.com
Gene expression differences between males and females are thought to be key for the
evolution of sexual dimorphism, and sex-biased genes are often used to study the molecular …

Gene expression phylogenies and ancestral transcriptome reconstruction resolves major transitions in the origins of pregnancy

K Mika, CM Whittington, BM McAllan, VJ Lynch - Elife, 2022 - elifesciences.org
Structural and physiological changes in the female reproductive system underlie the origins
of pregnancy in multiple vertebrate lineages. In mammals, the glandular portion of the lower …

Hybridization and gene expression: Beyond differentially expressed genes

A Runemark, EC Moore, EL Larson - Molecular Ecology, 2024 - Wiley Online Library
Gene expression has a key role in reproductive isolation, and studies of hybrid gene
expression have identified mechanisms causing hybrid sterility. Here, we review the …

Natural Variation in Sexual Traits and Gene Expression between Selfing and Outcrossing Arabidopsis lyrata Suggests Sexual Selection at Work

Ö İltaş, M Čertner, C Lafon Placette - Plant And Cell Physiology, 2024 - academic.oup.com
Flowering plants show significant diversity in sexual strategies, profoundly impacting the
evolution of sexual traits and associated genes. Sexual selection is one of the primary …