Epistasis in protein evolution
TN Starr, JW Thornton - Protein science, 2016 - Wiley Online Library
The structure, function, and evolution of proteins depend on physical and genetic
interactions among amino acids. Recent studies have used new strategies to explore the …
interactions among amino acids. Recent studies have used new strategies to explore the …
Causes of molecular convergence and parallelism in protein evolution
JF Storz - Nature Reviews Genetics, 2016 - nature.com
To what extent is the convergent evolution of protein function attributable to convergent or
parallel changes at the amino acid level? The mutations that contribute to adaptive protein …
parallel changes at the amino acid level? The mutations that contribute to adaptive protein …
Stability-mediated epistasis constrains the evolution of an influenza protein
John Maynard Smith compared protein evolution to the game where one word is converted
into another a single letter at a time, with the constraint that all intermediates are words …
into another a single letter at a time, with the constraint that all intermediates are words …
Biophysics of protein evolution and evolutionary protein biophysics
The study of molecular evolution at the level of protein-coding genes often entails comparing
large datasets of sequences to infer their evolutionary relationships. Despite the importance …
large datasets of sequences to infer their evolutionary relationships. Despite the importance …
Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes
The present review focuses on the evolution of proteins and the impact of amino acid
mutations on function from a structural perspective. Proteins evolve under the law of natural …
mutations on function from a structural perspective. Proteins evolve under the law of natural …
Addressing epistasis in the design of protein function
R Lipsh-Sokolik, SJ Fleishman - Proceedings of the National Academy of …, 2024 - pnas.org
Mutations in protein active sites can dramatically improve function. The active site, however,
is densely packed and extremely sensitive to mutations. Therefore, some mutations may …
is densely packed and extremely sensitive to mutations. Therefore, some mutations may …
Genes, mutations, and human inherited disease at the dawn of the age of personalized genomics
The number of reported germline mutations in human nuclear genes, either underlying or
associated with inherited disease, has now exceeded 100,000 in more than 3,700 different …
associated with inherited disease, has now exceeded 100,000 in more than 3,700 different …
[图书][B] Hemoglobin: insights into protein structure, function, and evolution
JF Storz - 2018 - books.google.com
The primary aim of this book is to provide a synthesis of our current understanding of
hemoglobin function and evolution, and to illustrate how research on one particular family of …
hemoglobin function and evolution, and to illustrate how research on one particular family of …
Compensatory mutations and epistasis for protein function
JF Storz - Current opinion in structural biology, 2018 - Elsevier
Highlights•Adaptive protein evolution may be facilitated by conditionally neutral
mutations.•Mutations can have different effects on different genetic backgrounds.• …
mutations.•Mutations can have different effects on different genetic backgrounds.• …
[图书][B] Mitonuclear ecology
GE Hill - 2019 - books.google.com
This novel text provides a concise synthesis of how the interactions between mitochondrial
and nuclear genes have played a major role in shaping the ecology and evolution of …
and nuclear genes have played a major role in shaping the ecology and evolution of …