Multi-omic approaches for host-microbiome data integration
A Chetty, R Blekhman - Gut Microbes, 2024 - Taylor & Francis
The gut microbiome interacts with the host through complex networks that affect physiology
and health outcomes. It is becoming clear that these interactions can be measured across …
and health outcomes. It is becoming clear that these interactions can be measured across …
[HTML][HTML] Methodological Considerations in Longitudinal Analyses of Microbiome Data: A Comprehensive Review
Biological processes underlying health and disease are inherently dynamic and are best
understood when characterized in a time-informed manner. In this comprehensive review …
understood when characterized in a time-informed manner. In this comprehensive review …
[HTML][HTML] Evidence supportive of a bacterial component in the etiology for Alzheimer's disease and for a temporal-spatial development of a pathogenic microbiome in …
Background Over the last few decades, a growing body of evidence suggests a role for
various infectious agents in Alzheimer's Disease (AD) pathogenesis. Despite diverse …
various infectious agents in Alzheimer's Disease (AD) pathogenesis. Despite diverse …
Should the microbiota of raw milk cheeses play a role in the definition of geographical indications and quality schemes within the European Union?
Fontana et al. which has been recently published (1). Based on a rather simplistic sampling
approach, the authors conclude that their results “highlighted the need for a profound …
approach, the authors conclude that their results “highlighted the need for a profound …
Kernel sufficient dimension reduction and variable selection for compositional data via amalgamation
Compositional data with a large number of components and an abundance of zeros are
frequently observed in many fields recently. Analyzing such sparse high-dimensional …
frequently observed in many fields recently. Analyzing such sparse high-dimensional …
Associations Between Walking Speed and Gut Microbiome Composition in Older Men From the MrOS Study
S Farsijani, JA Cauley, PM Cawthon… - The Journals of …, 2024 - academic.oup.com
Background Gut dysbiosis has been linked to frailty, but its association with early mobility
decline is unclear. Methods First, we determined the cross-sectional associations between …
decline is unclear. Methods First, we determined the cross-sectional associations between …
[HTML][HTML] Correlations in Compositional Data without Log Transformations
YV Monich, YD Nechipurenko - Axioms, 2023 - mdpi.com
This article proposes a method for determining the p-value of correlations in compositional
data, ie, those data that arise as a result of dividing original values by their sum. Data …
data, ie, those data that arise as a result of dividing original values by their sum. Data …
Rendimiento de modelos machine learning en la identificación de especies microbianas causales
A Duro Vizcaíno - 2024 - riunet.upv.es
[ES] El estudio del microbioma ha generado interés en el campo de la mejora genética
debido a su influencia sobre caracteres clave en producción animal. Es por ello que es muy …
debido a su influencia sobre caracteres clave en producción animal. Es por ello que es muy …
Statistical Methods for Microbiome Analysis: A brief review
M Bhattacharjee - arXiv preprint arXiv:2303.16722, 2023 - arxiv.org
Recent attacks of various viruses with having deep and extensive impact at a global scale
has warranted that microbiome be studied extensively and in a robust analytic framework …
has warranted that microbiome be studied extensively and in a robust analytic framework …