FPbase: a community-editable fluorescent protein database
TJ Lambert - Nature methods, 2019 - nature.com
To the Editor—The cloning and subsequent engineering of fluorescent proteins (FPs) has
revolutionized methods in biological research1, 2. There are now thousands of FPs …
revolutionized methods in biological research1, 2. There are now thousands of FPs …
A high-throughput multiparameter screen for accelerated development and optimization of soluble genetically encoded fluorescent biosensors
D Koveal, PC Rosen, DJ Meyer… - Nature …, 2022 - nature.com
Genetically encoded fluorescent biosensors are powerful tools used to track chemical
processes in intact biological systems. However, the development and optimization of …
processes in intact biological systems. However, the development and optimization of …
Optimizing the fluorescent protein toolbox and its use
S Duwé, P Dedecker - Current opinion in biotechnology, 2019 - Elsevier
Highlights•Fluorescent proteins continue to be essential tools in life sciences.•
Phototransformable FPs and biosensors facilitate advanced imaging experiments.• …
Phototransformable FPs and biosensors facilitate advanced imaging experiments.• …
Functional principles of genetically encoded fluorescent biosensors for metabolism and their quantitative use
D Koveal - Journal of Neurochemistry, 2024 - Wiley Online Library
Genetically encoded fluorescent biosensors provide an attractive means of measuring
chemical changes in single cells on fast timescales (milliseconds to seconds). While their …
chemical changes in single cells on fast timescales (milliseconds to seconds). While their …
Directed evolution of a bright variant of mCherry: suppression of nonradiative decay by fluorescence lifetime selections
The approximately linear scaling of fluorescence quantum yield (ϕ) with fluorescence
lifetime (τ) in fluorescent proteins (FPs) has inspired engineering of brighter fluorophores …
lifetime (τ) in fluorescent proteins (FPs) has inspired engineering of brighter fluorophores …
Photophysical engineering of fluorescent proteins: Accomplishments and challenges of physical chemistry strategies
S Mukherjee, R Jimenez - The Journal of Physical Chemistry B, 2022 - ACS Publications
Fluorescent proteins (FPs) have become ubiquitous tools for biological research and
concomitantly they are intriguing molecules that are amenable to study with a wide range of …
concomitantly they are intriguing molecules that are amenable to study with a wide range of …
Engineering of a brighter variant of the fusionred fluorescent protein using lifetime flow cytometry and structure-guided mutations
The development of fluorescent proteins (FPs) has revolutionized biological imaging.
FusionRed, a monomeric red FP (RFP), is known for its low cytotoxicity and correct …
FusionRed, a monomeric red FP (RFP), is known for its low cytotoxicity and correct …
Influence of fluorescence lifetime selections and conformational flexibility on brightness of fusionRed variants
S Mukherjee, N Douglas, R Jimenez - The Journal of Physical …, 2024 - ACS Publications
Fluorescent proteins (FPs) for bioimaging are typically developed by screening mutant
libraries for clones with improved photophysical properties. This approach has resulted in …
libraries for clones with improved photophysical properties. This approach has resulted in …
Energetic basis and design of enzyme function demonstrated using gfp, an excited-state enzyme
The past decades have witnessed an explosion of de novo protein designs with a
remarkable range of scaffolds. It remains challenging, however, to design catalytic functions …
remarkable range of scaffolds. It remains challenging, however, to design catalytic functions …
Rapid directed molecular evolution of fluorescent proteins in mammalian cells
S Babakhanova, EE Jung, K Namikawa… - Protein …, 2022 - Wiley Online Library
In vivo imaging of model organisms is heavily reliant on fluorescent proteins with high
intracellular brightness. Here we describe a practical method for rapid optimization of …
intracellular brightness. Here we describe a practical method for rapid optimization of …