Templated insertions: a smoking gun for polymerase theta-mediated end joining

J Schimmel, R van Schendel, JT den Dunnen… - Trends in Genetics, 2019 - cell.com
A recognized source of disease-causing genome alterations is erroneous repair of broken
chromosomes, which can be executed by two distinct mechanisms: non-homologous end …

Historical and clinical perspectives on chromosomal translocations

ES Wilch, CC Morton - Chromosome translocation, 2018 - Springer
Chromosomal translocations, rearrangements involving the exchange of segments between
chromosomes, were documented in humans in 1959. The first accurately reported clinical …

From cytogenetics to cytogenomics: whole-genome sequencing as a first-line test comprehensively captures the diverse spectrum of disease-causing genetic variation …

A Lindstrand, J Eisfeldt, M Pettersson, CMB Carvalho… - Genome medicine, 2019 - Springer
Background Since different types of genetic variants, from single nucleotide variants (SNVs)
to large chromosomal rearrangements, underlie intellectual disability, we evaluated the use …

Epigenetic maintenance of topological domains in the highly rearranged gibbon genome

NH Lazar, KA Nevonen, B O'Connell… - Genome …, 2018 - genome.cshlp.org
The relationship between evolutionary genome remodeling and the three-dimensional
structure of the genome remain largely unexplored. Here, we use the heavily rearranged …

[HTML][HTML] TIDDIT, an efficient and comprehensive structural variant caller for massive parallel sequencing data

J Eisfeldt, F Vezzi, P Olason, D Nilsson… - …, 2017 - ncbi.nlm.nih.gov
Reliable detection of large structural variation (> 1000 bp) is important in both rare and
common genetic disorders. Whole genome sequencing (WGS) is a technology that may be …

Genome sequencing explores complexity of chromosomal abnormalities in recurrent miscarriage

Z Dong, J Yan, F Xu, J Yuan, H Jiang, H Wang… - The American Journal of …, 2019 - cell.com
Recurrent miscarriage (RM) affects millions of couples globally, and half of them have no
demonstrated etiology. Genome sequencing (GS) is an enhanced and novel cytogenetic …

Induction of chromosomal translocations with CRISPR-Cas9 and other nucleases: understanding the repair mechanisms that give rise to translocations

E Brunet, M Jasin - Chromosome translocation, 2018 - Springer
Chromosomal translocations are associated with several tumor types, including
hematopoietic malignancies, sarcomas, and solid tumors of epithelial origin, due to their …

Resolving complex structural variants via nanopore sequencing

S Romagnoli, N Bartalucci, AM Vannucchi - Frontiers in Genetics, 2023 - frontiersin.org
The recent development of high-throughput sequencing platforms provided impressive
insights into the field of human genetics and contributed to considering structural variants …

Whole genome paired-end sequencing elucidates functional and phenotypic consequences of balanced chromosomal rearrangement in patients with developmental …

C Schluth-Bolard, F Diguet, N Chatron… - Journal of Medical …, 2019 - jmg.bmj.com
Background Balanced chromosomal rearrangements associated with abnormal phenotype
are rare events, but may be challenging for genetic counselling, since molecular …

Identification of balanced chromosomal rearrangements previously unknown among participants in the 1000 Genomes Project: implications for interpretation of …

Z Dong, H Wang, H Chen, H Jiang, J Yuan… - Genetics in …, 2018 - nature.com
Purpose Recent studies demonstrate that whole-genome sequencing enables detection of
cryptic rearrangements in apparently balanced chromosomal rearrangements (also known …