A framework for understanding gene expression plasticity and its influence on stress tolerance

HE Rivera, HE Aichelman, JE Fifer… - Molecular …, 2021 - Wiley Online Library
Phenotypic plasticity can serve as a stepping stone towards adaptation. Recently, studies
have shown that gene expression contributes to emergent stress responses such as thermal …

The behavioural and physiological ecology of embryos: responding to the challenges of life inside an egg

WG Du, R Shine - Biological Reviews, 2022 - Wiley Online Library
Adaptations of post‐hatching animals have attracted far more study than have embryonic
responses to environmental challenges, but recent research suggests that we have …

Associations between DNA methylation and gene regulation depend on chromatin accessibility during transgenerational plasticity

SN Bogan, ME Strader, GE Hofmann - BMC biology, 2023 - Springer
Background Epigenetic processes are proposed to be a mechanism regulating gene
expression during phenotypic plasticity. However, environmentally induced changes in DNA …

Nanoplastics induce epigenetic signatures of transgenerational impairments associated with reproduction in copepods under ocean acidification

YH Lee, MS Kim, Y Lee, DH Kim, JS Lee - Journal of Hazardous Materials, 2023 - Elsevier
Ocean acidification (OA) is one of many major global climate changes that pose a variety of
risks to marine ecosystems in different ways. Meanwhile, there is growing concern about …

Epigenetic‐associated phenotypic plasticity of the ocean acidification‐acclimated edible oyster in the mariculture environment

X Dang, YK Lim, Y Li, SB Roberts, L Li… - Molecular …, 2023 - Wiley Online Library
For marine invertebrates with a pelagic–benthic life cycle, larval exposure to ocean
acidification (OA) can affect adult performance in response to another environmental …

Third-generation sequencing reveals the adaptive role of the epigenome in three deep-sea polychaetes

M Perez, O Aroh, Y Sun, Y Lan… - Molecular Biology …, 2023 - academic.oup.com
The roles of DNA methylation in invertebrates are poorly characterized, and critical data are
missing for the phylum Annelida. We fill this knowledge gap by conducting the first genome …

Marine heatwave temperatures enhance larval performance but are meditated by paternal thermal history and inter-individual differences in the purple sea urchin …

TS Leach, GE Hofmann - Frontiers in Physiology, 2023 - frontiersin.org
Marine heatwave (MHW) events, characterized by periods of anomalous temperatures, are
an increasingly prevalent threat to coastal marine ecosystems. Given the seasonal …

Encyclopaedia of eukaryotic DNA methylation: from patterns to mechanisms and functions

P Sarkies - Biochemical Society Transactions, 2022 - portlandpress.com
DNA methylation is an epigenetic modification with a very long evolutionary history.
However, DNA methylation evolves surprisingly rapidly across eukaryotes. The genome …

Potential role of DNA methylation as a driver of plastic responses to the environment across cells, organisms, and populations

SN Bogan, SV Yi - Genome biology and evolution, 2024 - academic.oup.com
There is great interest in exploring epigenetic modifications as drivers of adaptive
organismal responses to environmental change. Extending this hypothesis to populations …

Symbiont shuffling induces differential DNA methylation responses to thermal stress in the coral Montastraea cavernosa

JA Rodriguez‐Casariego, R Cunning… - Molecular …, 2022 - Wiley Online Library
Algal symbiont shuffling in favour of more thermotolerant species has been shown to
enhance coral resistance to heat‐stress. Yet, the mechanistic underpinnings and long‐term …