Microbial metabolites in the marine carbon cycle
One-quarter of photosynthesis-derived carbon on Earth rapidly cycles through a set of short-
lived seawater metabolites that are generated from the activities of marine phytoplankton …
lived seawater metabolites that are generated from the activities of marine phytoplankton …
The best practice for microbiome analysis using R
With the gradual maturity of sequencing technology, many microbiome studies have
published, driving the emergence and advance of related analysis tools. R language is the …
published, driving the emergence and advance of related analysis tools. R language is the …
MIBiG 3.0: a community-driven effort to annotate experimentally validated biosynthetic gene clusters
With an ever-increasing amount of (meta) genomic data being deposited in sequence
databases,(meta) genome mining for natural product biosynthetic pathways occupies a …
databases,(meta) genome mining for natural product biosynthetic pathways occupies a …
microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data
Abstract microbeMASST, a taxonomically informed mass spectrometry (MS) search tool,
tackles limited microbial metabolite annotation in untargeted metabolomics experiments …
tackles limited microbial metabolite annotation in untargeted metabolomics experiments …
<? mode longmeta?> SPIRE: a Searchable, Planetary-scale mIcrobiome REsource
Meta'omic data on microbial diversity and function accrue exponentially in public
repositories, but derived information is often siloed according to data type, study or sampled …
repositories, but derived information is often siloed according to data type, study or sampled …
Mirusviruses link herpesviruses to giant viruses
DNA viruses have a major influence on the ecology and evolution of cellular organisms,,–,
but their overall diversity and evolutionary trajectories remain elusive. Here we carried out a …
but their overall diversity and evolutionary trajectories remain elusive. Here we carried out a …
A genomic catalogue of soil microbiomes boosts mining of biodiversity and genetic resources
Soil harbors a vast expanse of unidentified microbes, termed as microbial dark matter,
presenting an untapped reservoir of microbial biodiversity and genetic resources, but has …
presenting an untapped reservoir of microbial biodiversity and genetic resources, but has …
[HTML][HTML] Global marine microbial diversity and its potential in bioprospecting
The past two decades has witnessed a remarkable increase in the number of microbial
genomes retrieved from marine systems,. However, it has remained challenging to translate …
genomes retrieved from marine systems,. However, it has remained challenging to translate …
Temperature‐mediated microbial carbon utilization in China's lakes
Y Guo, S Gu, K Wu, AJ Tanentzap, J Yu… - Global Change …, 2023 - Wiley Online Library
Microbes play an important role in aquatic carbon cycling but we have a limited
understanding of their functional responses to changes in temperature across large …
understanding of their functional responses to changes in temperature across large …
Global distribution of marine microplastics and potential for biodegradation
B Chen, Z Zhang, T Wang, H Hu, G Qin, T Lu… - Journal of Hazardous …, 2023 - Elsevier
Microplastics are a growing marine environmental concern globally due to their high
abundance and persistent degradation. We created a global map for predicting marine …
abundance and persistent degradation. We created a global map for predicting marine …