Patterning embryos with oscillations: structure, function and dynamics of the vertebrate segmentation clock

AC Oates, LG Morelli, S Ares - Development, 2012 - journals.biologists.com
The segmentation clock is an oscillating genetic network thought to govern the rhythmic and
sequential subdivision of the elongating body axis of the vertebrate embryo into somites: the …

Segmental patterning of the vertebrate embryonic axis

ML Dequéant, O Pourquié - Nature Reviews Genetics, 2008 - nature.com
The body axis of vertebrates is composed of a serial repetition of similar anatomical modules
that are called segments or metameres. This particular mode of organization is especially …

A somitic Wnt16/Notch pathway specifies haematopoietic stem cells

WK Clements, AD Kim, KG Ong, JC Moore, ND Lawson… - Nature, 2011 - nature.com
Haematopoietic stem cells (HSCs) are a self-renewing population of cells that continuously
replenish all blood and immune cells during the lifetime of an individual,. HSCs are used …

Combined whole-mount fluorescence in situ hybridization and antibody staining in zebrafish embryos and larvae

J He, D Mo, J Chen, L Luo - Nature protocols, 2020 - nature.com
RNA fluorescence in situ hybridization (FISH) and antibody staining/immunofluorescence
(IF) are widely used to detect distributions of mRNAs and proteins. Here we describe a …

Synchrony dynamics during initiation, failure, and rescue of the segmentation clock

IH Riedel-Kruse, C Muller, AC Oates - Science, 2007 - science.org
The “segmentation clock” is thought to coordinate sequential segmentation of the body axis
in vertebrate embryos. This clock comprises a multicellular genetic network of synchronized …

Arterial-venous network formation during brain vascularization involves hemodynamic regulation of chemokine signaling

J Bussmann, SA Wolfe, AF Siekmann - Development, 2011 - journals.biologists.com
During angiogenic sprouting, newly forming blood vessels need to connect to the existing
vasculature in order to establish a functional circulatory loop. Previous studies have …

Noise-resistant and synchronized oscillation of the segmentation clock

K Horikawa, K Ishimatsu, E Yoshimoto, S Kondo… - Nature, 2006 - nature.com
Periodic somite segmentation in vertebrate embryos is controlled by the 'segmentation
clock', which consists of numerous cellular oscillators. Although the properties of a single …

Notch signaling regulates the extent of hair cell regeneration in the zebrafish lateral line

EY Ma, EW Rubel, DW Raible - Journal of Neuroscience, 2008 - Soc Neuroscience
Mechanosensory hair cells within the zebrafish lateral line spontaneously regenerate after
aminoglycoside-induced death. Exposure of 5-d-old larvae to 400 μm neomycin for 1 h …

Setting the tempo in development: an investigation of the zebrafish somite clock mechanism

F Giudicelli, EM Özbudak, GJ Wright, J Lewis - PLoS biology, 2007 - journals.plos.org
The somites of the vertebrate embryo are clocked out sequentially from the presomitic
mesoderm (PSM) at the tail end of the embryo. Formation of each somite corresponds to one …

Intercellular coupling regulates the period of the segmentation clock

L Herrgen, S Ares, LG Morelli, C Schröter, F Jülicher… - Current Biology, 2010 - cell.com
Background Coupled biological oscillators can tick with the same period. How this collective
period is established is a key question in understanding biological clocks. We explore this …