Alternative tumour-specific antigens

CC Smith, SR Selitsky, S Chai, PM Armistead… - Nature Reviews …, 2019 - nature.com
The study of tumour-specific antigens (TSAs) as targets for antitumour therapies has
accelerated within the past decade. The most commonly studied class of TSAs are those …

Best practices for bioinformatic characterization of neoantigens for clinical utility

MM Richters, H Xia, KM Campbell, WE Gillanders… - Genome medicine, 2019 - Springer
Neoantigens are newly formed peptides created from somatic mutations that are capable of
inducing tumor-specific T cell recognition. Recently, researchers and clinicians have …

St. Jude Cloud: a pediatric cancer genomic data-sharing ecosystem

C McLeod, AM Gout, X Zhou, A Thrasher, D Rahbarinia… - Cancer discovery, 2021 - AACR
Effective data sharing is key to accelerating research to improve diagnostic precision,
treatment efficacy, and long-term survival in pediatric cancer and other childhood …

Clonally expanded T cells reveal immunogenicity of rhabdoid tumors

A Leruste, J Tosello, RN Ramos, A Tauziède-Espariat… - Cancer cell, 2019 - cell.com
Rhabdoid tumors (RTs) are genomically simple pediatric cancers driven by the biallelic
inactivation of SMARCB1, leading to SWI/SNF chromatin remodeler complex deficiency …

Neo-antigen mRNA vaccines

A Esprit, W de Mey, R Bahadur Shahi, K Thielemans… - Vaccines, 2020 - mdpi.com
The interest in therapeutic cancer vaccines has caught enormous attention in recent years
due to several breakthroughs in cancer research, among which the finding that successful …

Childhood cancer: occurrence, treatment and risk of second primary malignancies

S Zahnreich, H Schmidberger - Cancers, 2021 - mdpi.com
Simple Summary Childhood cancers are mostly of unknown etiology and represent
devastating diagnoses. The clinical benefits of steadily increasing tumor control and survival …

Gene fusion neoantigens: Emerging targets for cancer immunotherapy

Y Wang, T Shi, X Song, B Liu, J Wei - Cancer letters, 2021 - Elsevier
Tumor neoantigens play an important role in current cancer immunotherapies. The most
commonly studied class of tumor neoantigens contains those derived from single-nucleotide …

Acute depletion of CTCF rewires genome-wide chromatin accessibility

B Xu, H Wang, S Wright, J Hyle, Y Zhang, Y Shao… - Genome biology, 2021 - Springer
Background The transcription factor CTCF appears indispensable in defining topologically
associated domain boundaries and maintaining chromatin loop structures within these …

Current state of immunotherapy and mechanisms of immune evasion in ewing sarcoma and osteosarcoma

V Evdokimova, H Gassmann, L Radvanyi… - Cancers, 2022 - mdpi.com
Simple Summary Pediatric sarcomas, including Ewing sarcoma and osteosarcoma, were
first to be treated with an anticancer vaccine 100 years ago. This review moves on from a …

Multi-omics discovery of exome-derived neoantigens in hepatocellular carcinoma

MW Löffler, C Mohr, L Bichmann, LK Freudenmann… - Genome medicine, 2019 - Springer
Background Although mutated HLA ligands are considered ideal cancer-specific
immunotherapy targets, evidence for their presentation is lacking in hepatocellular …