[HTML][HTML] Preserving replication fork integrity and competence via the homologous recombination pathway

AA Saada, SAE Lambert, AM Carr - DNA repair, 2018 - Elsevier
Flaws in the DNA replication process have emerged as a leading driver of genome
instability in human diseases. Alteration to replication fork progression is a defining feature …

CDK-independent and PCNA-dependent functions of p21 in DNA replication

SF Mansilla, MB De La Vega, NL Calzetta, SO Siri… - Genes, 2020 - mdpi.com
p21Waf/CIP1 is a small unstructured protein that binds and inactivates cyclin-dependent
kinases (CDKs). To this end, p21 levels increase following the activation of the p53 tumor …

Plasticity of Extrachromosomal and Intrachromosomal BRAF Amplifications in Overcoming Targeted Therapy Dosage Challenges

K Song, JK Minami, A Huang, SR Dehkordi, SH Lomeli… - Cancer discovery, 2022 - AACR
Focal amplifications (FA) can mediate targeted therapy resistance in cancer. Understanding
the structure and dynamics of FAs is critical for designing treatments that overcome plasticity …

Mechanisms underlying recurrent genomic amplification in human cancers

H Tanaka, T Watanabe - Trends in cancer, 2020 - cell.com
Focal copy-number increases (genomic amplification) pinpoint oncogenic driver genes and
therapeutic targets in cancer genomes. With the advent of genomic technologies, recurrent …

Extrachromosomal DNA: Biogenesis and Functions in Cancer

EJ Curtis, JC Rose, PS Mischel… - Annual Review of …, 2024 - annualreviews.org
In cancer, oncogenes can untether themselves from chromosomes onto circular,
extrachromosomal DNA (ecDNA) particles. ecDNA are common in many of the most …

Recent progress on circular RNA research in acute myeloid leukemia

M Jamal, T Song, B Chen, M Faisal, Z Hong… - Frontiers in …, 2019 - frontiersin.org
Acute myeloid leukemia (AML) is a myeloid malignancy characterized by the proliferation of
abnormal and immature myeloid blasts in the bone marrow. Circular RNA (circRNA) is a …

Quantitative assessment reveals the dominance of duplicated sequences in germline-derived extrachromosomal circular DNA

L Mouakkad-Montoya, MM Murata… - Proceedings of the …, 2021 - National Acad Sciences
Extrachromosomal circular DNA (eccDNA) originates from linear chromosomal DNA in
various human tissues under physiological and disease conditions. The genomic origins of …

Interplay between DNA replication stress, chromatin dynamics and DNA-damage response for the maintenance of genome stability

M Mognato, S Burdak-Rothkamm… - … Research/Reviews in …, 2021 - Elsevier
DNA replication stress is a major source of DNA damage, including double-stranded breaks
that promote DNA damage response (DDR) signaling. Inefficient repair of such lesions can …

Telomere and subtelomere R-loops and antigenic variation in trypanosomes

A Saha, VP Nanavaty, B Li - Journal of molecular biology, 2020 - Elsevier
Trypanosoma brucei is a kinetoplastid parasite that causes African trypanosomiasis, which
is fatal if left untreated. T. brucei regularly switches its major surface antigen, VSG, to evade …

Diverse roles of RAD18 and Y-family DNA polymerases in tumorigenesis

Y Yang, Y Gao, A Zlatanou, S Tateishi, V Yurchenko… - Cell Cycle, 2018 - Taylor & Francis
Mutagenesis is a hallmark and enabling characteristic of cancer cells. The E3 ubiquitin
ligase RAD18 and its downstream effectors, the 'Y-family'Trans-Lesion Synthesis (TLS) DNA …