Efficiency correction is required for accurate quantitative PCR analysis and reporting

JM Ruijter, RJ Barnewall, IB Marsh… - Clinical …, 2021 - academic.oup.com
Abstract Background Quantitative PCR (qPCR) aims to measure the DNA or RNA
concentration in diagnostic and biological samples based on the quantification cycle (Cq) …

Mobile small RNAs regulate genome-wide DNA methylation

MG Lewsey, TJ Hardcastle… - Proceedings of the …, 2016 - National Acad Sciences
RNA silencing at the transcriptional and posttranscriptional levels regulates endogenous
gene expression, controls invading transposable elements (TEs), and protects the cell …

[HTML][HTML] An antiviral defense role of AGO2 in plants

JJW Harvey, MG Lewsey, K Patel, J Westwood… - PloS one, 2011 - journals.plos.org
Background Argonaute (AGO) proteins bind to small-interfering (si) RNAs and micro (mi)
RNAs to target RNA silencing against viruses, transgenes and in regulation of mRNAs …

Why the need for qPCR publication guidelines?—The case for MIQE

SA Bustin - Methods, 2010 - Elsevier
The polymerase chain reaction (PCR) has matured from a labour-and time-intensive, low
throughput qualitative gel-based technique to an easily automated, rapid, high throughput …

[HTML][HTML] A comprehensive collection of experimentally validated primers for Polymerase Chain Reaction quantitation of murine transcript abundance

A Spandidos, X Wang, H Wang, S Dragnev, T Thurber… - BMC genomics, 2008 - Springer
Background Quantitative polymerase chain reaction (QPCR) is a widely applied analytical
method for the accurate determination of transcript abundance. Primers for QPCR have …

Neem oil based nanopesticide as an environmentally-friendly formulation for applications in sustainable agriculture: An ecotoxicological perspective

M Pascoli, MT Jacques, DA Agarrayua, DS Avila… - Science of the total …, 2019 - Elsevier
Sustainable agriculture encourages practices that present low risks to the environment and
human health. To this end, zein (corn protein) can be used to develop nanocarrier systems …

[HTML][HTML] Serious Overestimation in Quantitative PCR by Circular (Supercoiled) Plasmid Standard: Microalgal pcna as the Model Gene

Y Hou, H Zhang, L Miranda, S Lin - PloS one, 2010 - journals.plos.org
Quantitative real-time PCR (qPCR) has become a gold standard for the quantification of
nucleic acids and microorganism abundances, in which plasmid DNA carrying the target …

[HTML][HTML] Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom

Z Xu, D Zhang, J Hu, X Zhou, X Ye, KL Reichel… - BMC …, 2009 - Springer
Background As a major component of plant cell wall, lignin plays important roles in
mechanical support, water transport, and stress responses. As the main cause for the …

[HTML][HTML] A common base method for analysis of qPCR data and the application of simple blocking in qPCR experiments

MT Ganger, GD Dietz, SJ Ewing - BMC bioinformatics, 2017 - Springer
Background qPCR has established itself as the technique of choice for the quantification of
gene expression. Procedures for conducting qPCR have received significant attention; …

[HTML][HTML] Offspring of mothers fed a high fat diet display hepatic cell cycle inhibition and associated changes in gene expression and DNA methylation

KJ Dudley, DM Sloboda, KL Connor, J Beltrand… - PloS one, 2011 - journals.plos.org
The association between an adverse early life environment and increased susceptibility to
later-life metabolic disorders such as obesity, type 2 diabetes and cardiovascular disease is …