Ancient DNA analysis

L Orlando, R Allaby, P Skoglund… - Nature reviews …, 2021 - nature.com
Although the first ancient DNA molecules were extracted more than three decades ago, the
first ancient nuclear genomes could only be characterized after high-throughput sequencing …

[HTML][HTML] Integrating multi-omics data for crop improvement

F Scossa, S Alseekh, AR Fernie - Journal of plant physiology, 2021 - Elsevier
Our agricultural systems are now in urgent need to secure food for a growing world
population. To meet this challenge, we need a better characterization of plant genetic and …

Population genomics unravels the Holocene history of bread wheat and its relatives

X Zhao, Y Guo, L Kang, C Yin, A Bi, D Xu, Z Zhang… - Nature Plants, 2023 - nature.com
Deep knowledge of crop biodiversity is essential to improving global food security. Despite
bread wheat serving as a keystone crop worldwide, the population history of bread wheat …

Emerging evidence of plant domestication as a landscape-level process

RG Allaby, CJ Stevens, L Kistler, DQ Fuller - Trends in ecology & evolution, 2022 - cell.com
The evidence from ancient crops over the past decade challenges some of our most basic
assumptions about the process of domestication. The emergence of crops has been viewed …

Plant domestication and agricultural ecologies

DQ Fuller, T Denham, R Allaby - Current Biology, 2023 - cell.com
Plant life defines the environments to which animals adapt and provides the basis of food
webs. This was equally true for hunter-gatherer economies of ancestral humans, yet through …

The domestication syndrome in vegetatively propagated field crops

T Denham, H Barton, C Castillo, A Crowther… - Annals of …, 2020 - academic.oup.com
Background Vegetatively propagated crops are globally significant in terms of current
agricultural production, as well as for understanding the long-term history of early agriculture …

Triticeae crop genome biology: an endless frontier

Z Gao, J Bian, F Lu, Y Jiao, H He - Frontiers in Plant Science, 2023 - frontiersin.org
Triticeae, the wheatgrass tribe, includes several major cereal crops and their wild relatives.
Major crops within the Triticeae are wheat, barley and rye which are important for human …

Genetic basis of geographical differentiation and breeding selection for wheat plant architecture traits

Y Liu, K Shen, C Yin, X Xu, X Yu, B Ye, Z Sun, J Dong… - Genome Biology, 2023 - Springer
Background Plant architecture associated with increased grain yield and adaptation to the
local environments is selected during wheat (Triticum aestivum) breeding. The internode …

Are cereal grasses a single genetic system?

M Mascher, MP Marone, M Schreiber, N Stein - Nature Plants, 2024 - nature.com
In 1993, a passionate and provocative call to arms urged cereal researchers to consider the
taxon they study as a single genetic system and collaborate with each other. Since then, that …

Pan-genome bridges wheat structural variations with habitat and breeding

C Jiao, X Xie, C Hao, L Chen, Y Xie, V Garg, L Zhao… - Nature, 2024 - nature.com
Wheat is the second largest food crop with a very good breeding system and pedigree
record in China. Investigating the genomic footprints of wheat cultivars will unveil potential …