The what, where and how of delay activity

KK Sreenivasan, M D'Esposito - Nature reviews neuroscience, 2019 - nature.com
Working memory is characterized by neural activity that persists during the retention interval
of delay tasks. Despite the ubiquity of this delay activity across tasks, species and …

Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience

RA McDougal, TM Morse, T Carnevale… - Journal of computational …, 2017 - Springer
Neuron modeling may be said to have originated with the Hodgkin and Huxley action
potential model in 1952 and Rall's models of integrative activity of dendrites in 1964. Over …

NetPyNE, a tool for data-driven multiscale modeling of brain circuits

S Dura-Bernal, BA Suter, P Gleeson, M Cantarelli… - Elife, 2019 - elifesciences.org
Biophysical modeling of neuronal networks helps to integrate and interpret rapidly growing
and disparate experimental datasets at multiple scales. The NetPyNE tool (www. netpyne …

Mitochondria-associated membranes (MAMs): A potential therapeutic target for treating Alzheimer's disease

W Yu, H Jin, Y Huang - Clinical Science, 2021 - portlandpress.com
Abstract Alzheimer's disease (AD), a progressive neurodegenerative disorder, is a leading
global health concern for individuals and society. However, the potential mechanisms …

Genetic variants in Alzheimer disease—molecular and brain network approaches

C Gaiteri, S Mostafavi, CJ Honey, PL De Jager… - Nature Reviews …, 2016 - nature.com
Genetic studies in late-onset Alzheimer disease (LOAD) are aimed at identifying core
disease mechanisms and providing potential biomarkers and drug candidates to improve …

Reproducibility in computational neuroscience models and simulations

RA McDougal, AS Bulanova… - IEEE Transactions on …, 2016 - ieeexplore.ieee.org
Objective: Like all scientific research, computational neuroscience research must be
reproducible. Big data science, including simulation research, cannot depend exclusively on …

Excitatory and inhibitory effects of HCN channel modulation on excitability of layer V pyramidal cells

T Mäki-Marttunen, V Mäki-Marttunen - PLoS Computational …, 2022 - journals.plos.org
Dendrites of cortical pyramidal cells are densely populated by hyperpolarization-activated
cyclic nucleotide-gated (HCN) channels, aka I h channels. I h channels are targeted by …

Multiscale modeling in the clinic: diseases of the brain and nervous system

WW Lytton, J Arle, G Bobashev, S Ji, TL Klassen… - Brain informatics, 2017 - Springer
Computational neuroscience is a field that traces its origins to the efforts of Hodgkin and
Huxley, who pioneered quantitative analysis of electrical activity in the nervous system …

A unified computational model for cortical post-synaptic plasticity

T Mäki-Marttunen, N Iannella, AG Edwards, GT Einevoll… - Elife, 2020 - elifesciences.org
Signalling pathways leading to post-synaptic plasticity have been examined in many types
of experimental studies, but a unified picture on how multiple biochemical pathways …

An uncommon neuronal class conveys visual signals from rods and cones to retinal ganglion cells

BK Young, C Ramakrishnan… - Proceedings of the …, 2021 - National Acad Sciences
Neurons in the central nervous system (CNS) are distinguished by the neurotransmitter
types they release, their synaptic connections, morphology, and genetic profiles. To fully …