LNCcation: lncRNA localization and function

MC Bridges, AC Daulagala, A Kourtidis - Journal of Cell Biology, 2021 - rupress.org
Subcellular localization of RNAs has gained attention in recent years as a prevalent
phenomenon that influences numerous cellular processes. This is also evident for the large …

Intracellular mRNA transport and localized translation

S Das, M Vera, V Gandin, RH Singer… - Nature reviews Molecular …, 2021 - nature.com
Fine-tuning cellular physiology in response to intracellular and environmental cues requires
precise temporal and spatial control of gene expression. High-resolution imaging …

Atlas of subcellular RNA localization revealed by APEX-Seq

FM Fazal, S Han, KR Parker, P Kaewsapsak, J Xu… - Cell, 2019 - cell.com
We introduce APEX-seq, a method for RNA sequencing based on direct proximity labeling of
RNA using the peroxidase enzyme APEX2. APEX-seq in nine distinct subcellular locales …

Multiplexed protein maps link subcellular organization to cellular states

G Gut, MD Herrmann, L Pelkmans - Science, 2018 - science.org
INTRODUCTION Obtaining multiplexed molecular readouts from large numbers of single
cells in situ is an important technological goal to facilitate scientific discoveries in basic and …

Late endosomes act as mRNA translation platforms and sustain mitochondria in axons

JM Cioni, JQ Lin, AV Holtermann, M Koppers… - Cell, 2019 - cell.com
Local translation regulates the axonal proteome, playing an important role in neuronal
wiring and axon maintenance. How axonal mRNAs are localized to specific subcellular sites …

[HTML][HTML] A microRNA-initiated DNAzyme motor operating in living cells

H Peng, XF Li, H Zhang, XC Le - Nature communications, 2017 - nature.com
Synthetic DNA motors have great potential to mimic natural protein motors in cells but the
operation of synthetic DNA motors in living cells remains challenging and has not been …

High-throughput single-cell gene-expression profiling with multiplexed error-robust fluorescence in situ hybridization

JR Moffitt, J Hao, G Wang, KH Chen… - Proceedings of the …, 2016 - National Acad Sciences
Image-based approaches to single-cell transcriptomics, in which RNA species are identified
and counted in situ via imaging, have emerged as a powerful complement to single-cell …

Translation dynamics of single mRNAs in live cells and neurons

B Wu, C Eliscovich, YJ Yoon, RH Singer - Science, 2016 - science.org
Translation is the fundamental biological process converting mRNA information into
proteins. Single-molecule imaging in live cells has illuminated the dynamics of RNA …

Spatially resolved, highly multiplexed RNA profiling in single cells

KH Chen, AN Boettiger, JR Moffitt, S Wang, X Zhuang - Science, 2015 - science.org
INTRODUCTION The copy number and intracellular localization of RNA are important
regulators of gene expression. Measurement of these properties at the transcriptome scale …

Fungal morphogenesis, from the polarized growth of hyphae to complex reproduction and infection structures

M Riquelme, J Aguirre, S Bartnicki-García… - Microbiology and …, 2018 - Am Soc Microbiol
Filamentous fungi constitute a large group of eukaryotic microorganisms that grow by
forming simple tube-like hyphae that are capable of differentiating into more-complex …