Defining and quantifying the core microbiome: challenges and prospects

AT Neu, EE Allen, K Roy - Proceedings of the National …, 2021 - National Acad Sciences
The term “core microbiome” has become widely used in microbial ecology over the last
decade. Broadly, the core microbiome refers to any set of microbial taxa, or the genomic and …

Emerging strategies for precision microbiome management in diverse agroecosystems

E French, I Kaplan, A Iyer-Pascuzzi, CH Nakatsu… - Nature plants, 2021 - nature.com
Substantial efforts to characterize the structural and functional diversity of soil, plant and
insect-associated microbial communities have illuminated the complex interacting domains …

Biostimulant action of protein hydrolysates: Unraveling their effects on plant physiology and microbiome

G Colla, L Hoagland, M Ruzzi, M Cardarelli… - Frontiers in plant …, 2017 - frontiersin.org
Plant-derived protein hydrolysates (PHs) have gained prominence as plant biostimulants
because of their potential to increase the germination, productivity and quality of a wide …

Interactions between plants and soil shaping the root microbiome under abiotic stress

K Hartman, SG Tringe - Biochemical Journal, 2019 - portlandpress.com
Plants growing in soil develop close associations with soil microorganisms, which inhabit
the areas around, on, and inside their roots. These microbial communities and their …

The plant microbiota: systems-level insights and perspectives

DB Müller, C Vogel, Y Bai… - Annual review of genetics, 2016 - annualreviews.org
Plants do not grow as axenic organisms in nature, but host a diverse community of
microorganisms, termed the plant microbiota. There is an increasing awareness that the …

Antibiotic resistomes in plant microbiomes

QL Chen, HL Cui, JQ Su, J Penuelas, YG Zhu - Trends in plant science, 2019 - cell.com
Microorganisms associated with plants may alter the traits of the human microbiome
important for human health, but this alteration has largely been overlooked. The plant …

[HTML][HTML] Harnessing the plant microbiome to promote the growth of agricultural crops

J Zhang, J Cook, JT Nearing, J Zhang… - Microbiological …, 2021 - Elsevier
The rhizosphere microbiome is composed of diverse microbial organisms, including
archaea, viruses, fungi, bacteria as well as eukaryotic microorganisms, which occupy a …

Seed-transmitted bacteria and fungi dominate juvenile plant microbiomes

D Johnston-Monje, JP Gutiérrez… - Frontiers in …, 2021 - frontiersin.org
Plant microbiomes play an important role in agricultural productivity, but there is still much to
learn about their provenance, diversity, and organization. In order to study the role of vertical …

Plant root-microbe communication in shaping root microbiomes

A Lareen, F Burton, P Schäfer - Plant molecular biology, 2016 - Springer
A growing body of research is highlighting the impacts root-associated microbial
communities can have on plant health and development. These impacts can include …

Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming

K Hartman, MGA van der Heijden, RA Wittwer… - Microbiome, 2018 - Springer
Background Harnessing beneficial microbes presents a promising strategy to optimize plant
growth and agricultural sustainability. Little is known to which extent and how specifically …