A survey on crossover operators

G Pavai, TV Geetha - ACM Computing Surveys (CSUR), 2016 - dl.acm.org
Crossover is an important operation in the Genetic Algorithms (GA). Crossover operation is
responsible for producing offspring for the next generation so as to explore a much wider …

A memetic algorithm based on an NSGA-II scheme for phylogenetic tree inference

M Villalobos-Cid, M Dorn… - IEEE transactions on …, 2018 - ieeexplore.ieee.org
Phylogenetic inference allows building a hypothesis about the evolutionary relationships
between a group of species, which is usually represented as a tree. The phylogenetic …

Multi-objective evolutionary algorithms and phylogenetic inference with multiple data sets

L Poladian, LS Jermiin - Soft Computing, 2006 - Springer
Evolutionary relationships among species are usually (1) illustrated by means of a
phylogenetic tree and (2) inferred by optimising some measure of fitness, such as the total …

MO‐Phylogenetics: a phylogenetic inference software tool with multi‐objective evolutionary metaheuristics

C Zambrano‐Vega, AJ Nebro… - Methods in Ecology …, 2016 - Wiley Online Library
Phylogenetic inference is the process of searching and reconstructing the best phylogenetic
tree that explains the evolution of species from a given data set. It is considered as an NP …

Applying a multiobjective metaheuristic inspired by honey bees to phylogenetic inference

S Santander-Jiménez, MA Vega-Rodríguez - Biosystems, 2013 - Elsevier
The development of increasingly popular multiobjective metaheuristics has allowed
bioinformaticians to deal with optimization problems in computational biology where multiple …

A multi-criterion evolutionary approach applied to phylogenetic reconstruction

W Cancino, ACB Delbem - New Achievements in Evolutionary …, 2010 - books.google.com
Phylogenetic inference is one of the central problems in computational biology. It consists in
finding the best tree that explains the evolutionary history of species from a given dataset …

A GA for maximum likelihood phylogenetic inference using neighbour-joining as a genotype to phenotype mapping

L Poladian - Proceedings of the 7th annual conference on Genetic …, 2005 - dl.acm.org
Evolutionary relationships among species can be represented by a phylogenetic tree and
inferred by optimising some measure of fitness, such as the statistical likelihood of the tree …

A hybrid approach to parallelize a fast non‐dominated sorting genetic algorithm for phylogenetic inference

S Santander‐Jiménez… - Concurrency and …, 2015 - Wiley Online Library
The field of computational biology encloses a wide range of optimization problems that show
non‐deterministic polynomial‐time hard complexities. Nowadays, phylogeneticians are …

A multiobjective proposal based on the firefly algorithm for inferring phylogenies

S Santander-Jiménez, MA Vega-Rodríguez - … , Machine Learning and Data …, 2013 - Springer
Recently, swarm intelligence algorithms have been applied successfully to a wide variety of
optimization problems in Computational Biology. Phylogenetic inference represents one of …

[HTML][HTML] Using MOEA with redistribution and consensus branches to infer phylogenies

X Min, M Zhang, S Yuan, S Ge, X Liu, X Zeng… - International journal of …, 2017 - mdpi.com
In recent years, to infer phylogenies, which are NP-hard problems, more and more research
has focused on using metaheuristics. Maximum Parsimony and Maximum Likelihood are …