Nematode chromosomes

PM Carlton, RE Davis, S Ahmed - Genetics, 2022 - academic.oup.com
The nematode Caenorhabditis elegans has shed light on many aspects of eukaryotic
biology, including genetics, development, cell biology, and genomics. A major factor in the …

Photorhabdus: a tale of contrasting interactions

DJ Clarke - Microbiology, 2020 - microbiologyresearch.org
Different model systems have, over the years, contributed to our current understanding of the
molecular mechanisms underpinning the various types of interaction between bacteria and …

Pheno- and genotyping in vitro dauer juvenile recovery in the nematode Heterorhabditis bacteriophora

Z Wang, C Ogaya, V Dörfler, M Barg, RU Ehlers… - Applied Microbiology …, 2023 - Springer
The entomopathogenic nematode (EPN) Heterorhabditis bacteriophora is an effective
biological-control agent of insect pests. The dauer juveniles (DJs) seek for, infect insects …

Single-worm long-read sequencing reveals genome diversity in free-living nematodes

YC Lee, HM Ke, YC Liu, HH Lee, MC Wang… - Nucleic Acids …, 2023 - academic.oup.com
Obtaining sufficient genetic material from a limited biological source is currently the primary
operational bottleneck in studies investigating biodiversity and genome evolution. In this …

Characterization of the phenotypic and genotypic tolerance to abiotic stresses of natural populations of Heterorhabditis bacteriophora

N Levy, A Faigenboim, L Salame, C Molina… - Scientific Reports, 2020 - nature.com
Entomopathogenic nematodes are effective biocontrol agents against arthropod pests.
However, their efficacy is limited due to sensitivity to environmental extremes. The objective …

Improving Transgenesis Efficiency and CRISPR-Associated Tools Through Codon Optimization and Native Intron Addition in Pristionchus Nematodes

Z Han, WS Lo, JW Lightfoot, H Witte, S Sun… - Genetics, 2020 - academic.oup.com
A lack of appropriate molecular tools is one obstacle that prevents in-depth mechanistic
studies in many organisms. Transgenesis, clustered regularly interspaced short palindromic …

The community-curated Pristionchus pacificus genome facilitates automated gene annotation improvement in related nematodes

C Rödelsperger - BMC genomics, 2021 - Springer
Abstract Background The nematode Pristionchus pacificus is an established model
organism for comparative studies with Caenorhabditis elegans. Over the past years, it …

Single nucleotide polymorphism markers in Heterorhabditis bacteriophora associated with virulence at low temperature

G Godina, C Kirsch, V Dörfler, M Barg, PR Singh… - Nematology, 2022 - brill.com
The entomopathogenic nematode (EPN), Heterorhabditis bacteriophora, is an important
biological control agent worldwide. Industrially produced EPN need to meet the climatic …

Improved Genome Assembly and Annotation of the Soybean Aphid (Aphis glycines Matsumura)

TC Mathers - G3: Genes, Genomes, Genetics, 2020 - academic.oup.com
Aphids are an economically important insect group due to their role as plant disease vectors.
Despite this economic impact, genomic resources have only been generated for a small …

Crowdsourcing and the feasibility of manual gene annotation: A pilot study in the nematode Pristionchus pacificus

C Rödelsperger, M Athanasouli, M Lenuzzi… - Scientific Reports, 2019 - nature.com
Nematodes such as Caenorhabditis elegans are powerful systems to study basically all
aspects of biology. Their species richness together with tremendous genetic knowledge from …