The human oral microbiome in health and disease: from sequences to ecosystems
JR Willis, T Gabaldón - Microorganisms, 2020 - mdpi.com
The human oral cavity is home to an abundant and diverse microbial community (ie, the oral
microbiome), whose composition and roles in health and disease have been the focus of …
microbiome), whose composition and roles in health and disease have been the focus of …
Commensal fungi in health and disease
JJ Limon, JH Skalski, DM Underhill - Cell host & microbe, 2017 - cell.com
Fungi are increasingly being recognized as common members of the microbiomes found on
nearly all mucosal surfaces, and interest is growing in understanding how these organisms …
nearly all mucosal surfaces, and interest is growing in understanding how these organisms …
The integrative human microbiome project
HMP Integrative, LM Proctor, HH Creasy… - …, 2019 - ui.adsabs.harvard.edu
Abstract The NIH Human Microbiome Project (HMP) has been carried out over ten years and
two phases to provide resources, methods, and discoveries that link interactions between …
two phases to provide resources, methods, and discoveries that link interactions between …
Microbial strain-level population structure and genetic diversity from metagenomes
Among the human health conditions linked to microbial communities, phenotypes are often
associated with only a subset of strains within causal microbial groups. Although it has been …
associated with only a subset of strains within causal microbial groups. Although it has been …
Healthy human gastrointestinal microbiome: composition and function after a decade of exploration
The human gastrointestinal (GI) tract contains communities of microbes (bacteria, fungi,
viruses) that vary by anatomic location and impact human health. Microbial communities …
viruses) that vary by anatomic location and impact human health. Microbial communities …
Structure, function and diversity of the healthy human microbiome
nature, 2012 - nature.com
Studies of the human microbiome have revealed that even healthy individuals differ
remarkably in the microbes that occupy habitats such as the gut, skin and vagina. Much of …
remarkably in the microbes that occupy habitats such as the gut, skin and vagina. Much of …
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products
Recent advances in single-cell genomics provide an alternative to largely gene-centric
metagenomics studies, enabling whole-genome sequencing of uncultivated bacteria …
metagenomics studies, enabling whole-genome sequencing of uncultivated bacteria …
The road to metagenomics: from microbiology to DNA sequencing technologies and bioinformatics
A Escobar-Zepeda, A Vera-Ponce de León… - Frontiers in …, 2015 - frontiersin.org
The study of microorganisms that pervade each and every part of this planet has
encountered many challenges through time such as the discovery of unknown organisms …
encountered many challenges through time such as the discovery of unknown organisms …
Assembling genomes and mini-metagenomes from highly chimeric reads
Recent advances in single-cell genomics provide an alternative to gene-centric
metagenomics studies, enabling whole genome sequencing of uncultivated bacteria …
metagenomics studies, enabling whole genome sequencing of uncultivated bacteria …
Compositional and functional features of the gastrointestinal microbiome and their effects on human health
EB Hollister, C Gao, J Versalovic - Gastroenterology, 2014 - Elsevier
The human gastrointestinal tract contains distinct microbial communities that differ in
composition and function based on their location, as well as age, sex, race/ethnicity, and diet …
composition and function based on their location, as well as age, sex, race/ethnicity, and diet …