Basic overview of chemoinformatics
T Engel - Journal of chemical information and modeling, 2006 - ACS Publications
There is no particular point in time that determines when chemoinformatics was founded or
established. It slowly evolved from several, often quite humble beginnings. Scientists in …
established. It slowly evolved from several, often quite humble beginnings. Scientists in …
[PDF][PDF] AceDRG: a stereochemical description generator for ligands
The program AceDRG is designed for the derivation of stereochemical information about
small molecules. It uses local chemical and topological environment-based atom typing to …
small molecules. It uses local chemical and topological environment-based atom typing to …
Computer‐aided synthesis design: 40 years on
A Cook, AP Johnson, J Law… - Wiley …, 2012 - Wiley Online Library
The discipline of retrosynthetic analysis is now just over 40 years old. From the earliest day,
attempts were made to incorporate this approach into computer programs to test the extent …
attempts were made to incorporate this approach into computer programs to test the extent …
LigandScout: 3-D pharmacophores derived from protein-bound ligands and their use as virtual screening filters
From the historically grown archive of protein− ligand complexes in the Protein Data Bank
small organic ligands are extracted and interpreted in terms of their chemical characteristics …
small organic ligands are extracted and interpreted in terms of their chemical characteristics …
[引用][C] An Introduction to Chemoinformatics
AR Leach - 2007 - books.google.com
Chemoinformatics draws upon techniques from many disciplines including computer
science, mathematics, computational chemistry and data visualisation to tackle these …
science, mathematics, computational chemistry and data visualisation to tackle these …
The scaffold tree− visualization of the scaffold universe by hierarchical scaffold classification
A Schuffenhauer, P Ertl, S Roggo… - Journal of chemical …, 2007 - ACS Publications
A hierarchical classification of chemical scaffolds (molecular framework, which is obtained
by pruning all terminal side chains) has been introduced. The molecular frameworks form …
by pruning all terminal side chains) has been introduced. The molecular frameworks form …
Quest for the rings. In silico exploration of ring universe to identify novel bioactive heteroaromatic scaffolds
P Ertl, S Jelfs, J Mühlbacher… - Journal of medicinal …, 2006 - ACS Publications
Bioactive molecules only contain a relatively limited number of unique ring types. To identify
those ring properties and structural characteristics that are necessary for biological activity, a …
those ring properties and structural characteristics that are necessary for biological activity, a …
MATCH: An atom‐typing toolset for molecular mechanics force fields
JD Yesselman, DJ Price, JL Knight… - Journal of …, 2012 - Wiley Online Library
We introduce a toolset of program libraries collectively titled multipurpose atom‐typer for
CHARMM (MATCH) for the automated assignment of atom types and force field parameters …
CHARMM (MATCH) for the automated assignment of atom types and force field parameters …
Crystal nets as graphs: Terminology and definitions
O Delgado-Friedrichs, M O'Keeffe - Journal of Solid State Chemistry, 2005 - Elsevier
Crystal nets as graphs: Terminology and definitions - ScienceDirect Skip to main contentSkip to
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A genetic algorithm for the automated generation of molecules within constraints
RC Glen, AWR Payne - Journal of Computer-Aided Molecular Design, 1995 - Springer
A genetic algorithm has been designed which generates molecular structures within
constraints. The constraints may be any useful function, for example an enzyme active site, a …
constraints. The constraints may be any useful function, for example an enzyme active site, a …