Genomic selection in tropical perennial crops and plantation trees: a review

EG Seyum, NH Bille, WG Abtew, N Munyengwa… - Molecular …, 2022 - Springer
To overcome the multiple challenges currently faced by agriculture, such as climate change
and soil deterioration, more efficient plant breeding strategies are required. Genomic …

Enviromic prediction enables the characterization and mapping of Eucalyptus globulus Labill breeding zones

AN Callister, G Costa-Neto, BP Bradshaw… - Tree Genetics & …, 2024 - Springer
Genotype-environment interaction is pervasive in forest genetics. Delineation of spatial
breeding zones (BZs) is fundamental for accommodating genotype-environment interaction …

Application of linear mixed models for multiple harvest/site trial analyses in perennial plant breeding

SFS Chaves, JSPC Evangelista, RS Alves… - Tree Genetics & …, 2022 - Springer
The optimization of perennial plant breeding necessarily involves the evaluation of multi-
harvest and/or multi-site trials. In these situations, modeling covariance structures can …

Envirotype approach for soybean genotype selection through the integration of georeferenced climate and genetic data using artificial neural networks

BG Leichtweis, L de Faria Silva, MA Peixoto… - Euphytica, 2024 - Springer
The selection of better-evaluated genotypes for a target region depends on the
characterization of the climate conditions of the environment. With the advancement of …

Selection index based on random regression model in 'Tahiti'acid lime

RG Malikouski, RS Alves, MA Peixoto, FM Ferreira… - Euphytica, 2022 - Springer
An accurate and efficient statistical method for repeated measures analysis and selection of
scion/rootstock combinations (SRC) is a fundamental prerequisite for genetic progress in …

Megavariate methods capture complex genotype-by-environment interactions

A Xavier, D Runcie, D Habier - Genetics, 2024 - academic.oup.com
Genomic prediction models that capture genotype-by-environment (GxE) interaction are
useful for predicting site-specific performance by leveraging information among related …

Remote sensing for estimating genetic parameters of biomass accumulation and modeling stability of growth curves in alfalfa

R Thapa, KH Kunze, J Hansen, C Pierce… - G3: Genes …, 2024 - academic.oup.com
Multispectral imaging by unoccupied aerial vehicles provides a nondestructive, high-
throughput approach to measure biomass accumulation over successive alfalfa (Medicago …

Integrating environmental gradients into breeding: application of genomic reactions norms in a perennial species

V Papin, A Bosc, L Sanchez, L Bouffier - Heredity, 2024 - nature.com
Global warming threatens the productivity of forest plantations. We propose here the
integration of environmental information into a genomic evaluation scheme using individual …

Prediction and mapping the productivity of eucalyptus clones with environmental covariates

LOS da Costa, ICG de Souza, ACM Fernandes… - Tree Genetics & …, 2024 - Springer
The quantitative nature of wood production poses a challenge for breeders. The complex
interaction of genotypes with environments (G× E) makes cultivars recommendation difficult …

Random regression for modeling yield genetic trajectories in Jatropha curcas breeding

MA Peixoto, RS Alves, IF Coelho, JSPC Evangelista… - Plos one, 2020 - journals.plos.org
Random regression models (RRM) are a powerful tool to evaluate genotypic plasticity over
time. However, to date, RRM remains unexplored for the analysis of repeated measures in …