In silico subtractive genomics for target identification in human bacterial pathogens

D Barh, S Tiwari, N Jain, A Ali… - Drug Development …, 2011 - Wiley Online Library
Target identification is the first step in the drug and vaccine discovery process; in silico
subtractive genomics is widely used in this process. Using this approach, in recent years, a …

Computational approaches to predicting essential proteins: a survey

J Wang, W Peng, FX Wu - PROTEOMICS–Clinical Applications, 2013 - Wiley Online Library
Essential proteins are indispensable to support cellular life. Identifying essential proteins
can help us understand the minimal requirements for cell survival, which plays a significant …

targetTB: A target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis

K Raman, K Yeturu, N Chandra - BMC systems biology, 2008 - Springer
Background Tuberculosis still remains one of the largest killer infectious diseases,
warranting the identification of newer targets and drugs. Identification and validation of …

Identification of Putative Vaccine and Drug Targets against the Methicillin-Resistant Staphylococcus aureus by Reverse Vaccinology and Subtractive Genomics …

RS Naorem, BD Pangabam, SS Bora, G Goswami… - Molecules, 2022 - mdpi.com
Methicillin-resistant Staphylococcus aureus (MRSA) is an opportunistic pathogen and
responsible for causing life-threatening infections. The emergence of hypervirulent and …

[HTML][HTML] Fresh garlic extract enhances the antimicrobial activities of antibiotics on resistant strains in vitro

G Li, X Ma, L Deng, X Zhao, Y Wei, Z Gao… - Jundishapur journal …, 2015 - ncbi.nlm.nih.gov
Background: Infections caused by strains with multi-drug resistance are difficult to treat with
standard antibiotics. Garlic is a powerful remedy to protect against infections of many …

Differential analysis of Orientia tsutsugamushi genomes for therapeutic target identification and possible intervention through natural product inhibitor screening

Z Basharat, U Akhtar, K Khan, G Alotaibi, K Jalal… - Computers in Biology …, 2022 - Elsevier
Orientia tsutsugamushi (Ott) is a causative agent of scrub typhus, and one of the emerging
pathogens that could affect a large human population. It is one of the misdiagnosed and …

Comparative Genomics Analysis of Mycobacterium ulcerans for the Identification of Putative Essential Genes and Therapeutic Candidates

AM Butt, I Nasrullah, S Tahir, Y Tong - 2012 - journals.plos.org
Mycobacterium ulcerans, the causative agent of Buruli ulcer, is the third most common
mycobacterial disease after tuberculosis and leprosy. The present treatment options are …

Vaccine Development Against Leishmania donovani

A Das, N Ali - Frontiers in immunology, 2012 - frontiersin.org
Visceral leishmaniasis (VL) caused by Leishmania donovani and Leishmania
infantum/chagasi represents the second most challenging infectious disease worldwide …

An In Silico Identification of Common Putative Vaccine Candidates against Treponema pallidum: A Reverse Vaccinology and Subtractive Genomics Based Approach

A Kumar Jaiswal, S Tiwari, SB Jamal, D Barh… - International journal of …, 2017 - mdpi.com
Sexually transmitted infections (STIs) are caused by a wide variety of bacteria, viruses, and
parasites that are transmitted from one person to another primarily by vaginal, anal, or oral …

In silico identification of candidate drug and vaccine targets from various pathways in Neisseria gonorrhoeae

D Barh, A Kumar - In silico biology, 2009 - content.iospress.com
Neisseria gonorrhoeae is responsible for causing gonorrhea, one of the most common
sexually transmitted diseases prevailing globally. Although extensive researches are in …