Cophylogenetic methods to untangle the evolutionary history of ecological interactions
Myriad branches in the tree of life are intertwined through ecological relationships. Biologists
have long hypothesized that intimate symbioses between lineages can influence …
have long hypothesized that intimate symbioses between lineages can influence …
Next-generation cophylogeny: unravelling eco-evolutionary processes
A fundamental question in evolutionary biology is how microevolutionary processes
translate into species diversification. Cophylogeny provides an appropriate framework to …
translate into species diversification. Cophylogeny provides an appropriate framework to …
Assessing co‐diversification in host‐associated microbiomes
AH Moeller, JG Sanders, DD Sprockett… - Journal of Evolutionary …, 2023 - academic.oup.com
When lineages of hosts and microbial symbionts engage in intimate interactions over
evolutionary timescales, they can diversify in parallel (ie, co‐diversify), producing …
evolutionary timescales, they can diversify in parallel (ie, co‐diversify), producing …
Phylogenetic framework for coevolutionary studies: a compass for exploring jungles of tangled trees
A Martínez-Aquino - Current Zoology, 2016 - academic.oup.com
Phylogenetics is used to detect past evolutionary events, from how species originated to
how their ecological interactions with other species arose, which can mirror cophylogenetic …
how their ecological interactions with other species arose, which can mirror cophylogenetic …
A statistical method for analysing cospeciation in tritrophic ecology using electrical circuit theory
C Nooney, S Barber, A Gusnanto… - Statistical Applications in …, 2017 - degruyter.com
We introduce a new method to test efficiently for cospeciation in tritrophic systems. Our
method utilises an analogy with electrical circuit theory to reduce higher order systems into …
method utilises an analogy with electrical circuit theory to reduce higher order systems into …
Next-generation cophylogeny: unravelling eco-evolutionary processes
A fundamental question in evolutionary biology is how microevolutionary processes
translate into species diversification. Cophylogeny provides an appropriate framework to …
translate into species diversification. Cophylogeny provides an appropriate framework to …
Cluster Detection by Lifting with Application to Phylogenetics
N Bozkus - 2018 - etheses.whiterose.ac.uk
In this thesis, we propose a new algorithm which automatically detects the number of
clusters in a tree structure data set by denoising some generalized node values in the tree …
clusters in a tree structure data set by denoising some generalized node values in the tree …
Supplementary material for “A statistical method for analysing cospeciation in tritrophic ecology using electrical circuit theory”
C Nooney, S Barber, A Gusnanto, WR Gilks - degruyter.com
The rejection rate plots for Simulation Method 3 in section 3.2 of the main paper are
displayed in Figure S3. The rejection rates increase as the systems become more …
displayed in Figure S3. The rejection rates increase as the systems become more …
[PDF][PDF] Cophylogenetic analysis of dated trees
B Drinkwater - 2016 - core.ac.uk
Parasites and the associations they form with their hosts is an important area of research
due to the associated health risks which parasites pose to the human population. The …
due to the associated health risks which parasites pose to the human population. The …
Statistical Analysis of Coevolution in Protein Structure and in Ecology
C Nooney - 2016 - etheses.whiterose.ac.uk
In this thesis we explore the theory of coevolution. Yip et al.(2008) define coevolution to be
the change in one biological object as a result of the change in one or more associated …
the change in one biological object as a result of the change in one or more associated …