Mycobiome diversity: high-throughput sequencing and identification of fungi
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
Toward a fully resolved fungal tree of life
In this review, we discuss the current status and future challenges for fully elucidating the
fungal tree of life. In the last 15 years, advances in genomic technologies have …
fungal tree of life. In the last 15 years, advances in genomic technologies have …
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …
second largest group of organisms based on global richness estimates, with around 3 …
High-throughput sequencing view on the magnitude of global fungal diversity
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
High-level classification of the Fungi and a tool for evolutionary ecological analyses
High-throughput sequencing studies generate vast amounts of taxonomic data. Evolutionary
ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due …
ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due …
Notes, outline and divergence times of Basidiomycota
The Basidiomycota constitutes a major phylum of the kingdom Fungi and is second in
species numbers to the Ascomycota. The present work provides an overview of all validly …
species numbers to the Ascomycota. The present work provides an overview of all validly …
Forest microbiome: diversity, complexity and dynamics
P Baldrian - FEMS Microbiology reviews, 2017 - academic.oup.com
Globally, forests represent highly productive ecosystems that act as carbon sinks where soil
organic matter is formed from residuals after biomass decomposition as well as from …
organic matter is formed from residuals after biomass decomposition as well as from …
[HTML][HTML] ITS alchemy: on the use of ITS as a DNA marker in fungal ecology
H Kauserud - Fungal Ecology, 2023 - Elsevier
High throughput sequencing of PCR amplicons derived from environmental DNA (aka DNA
metabarcoding) has become an integral part of fungal ecology, enabling in-depth …
metabarcoding) has become an integral part of fungal ecology, enabling in-depth …
Integrating chytrid fungal parasites into plankton ecology: research gaps and needs
Chytridiomycota, often referred to as chytrids, can be virulent parasites with the potential to
inflict mass mortalities on hosts, causing eg changes in phytoplankton size distributions and …
inflict mass mortalities on hosts, causing eg changes in phytoplankton size distributions and …
Fungi associated with decomposing deadwood in a natural beech-dominated forest
P Baldrian, P Zrůstová, V Tláskal, A Davidová… - Fungal Ecology, 2016 - Elsevier
Deadwood represents a specific habitat of particular importance in natural, unmanaged
forests where wood is not harvested. Here, we characterized the basic wood chemistry …
forests where wood is not harvested. Here, we characterized the basic wood chemistry …