Recent advances in cancer fusion transcript detection

R Dorney, BP Dhungel, JEJ Rasko… - Briefings in …, 2023 - academic.oup.com
Extensive investigation of gene fusions in cancer has led to the discovery of novel
biomarkers and therapeutic targets. To date, most studies have neglected chromosomal …

Emerging role of LncRNAs in ischemic stroke—novel insights into the regulation of inflammation

Y Pan, Q Jiao, W Wei, T Zheng, X Yang… - Journal of Inflammation …, 2021 - Taylor & Francis
As a crucial kind of pervasive gene, long noncoding RNAs (lncRNAs) are abundant and key
players in brain function as well as numerous neurological disorders, especially ischemic …

A novel pyroptosis-associated lncRNA LINC01133 promotes pancreatic adenocarcinoma development via miR-30b-5p/SIRT1 axis

J Li, J Lin, Y Ji, X Wang, D Fu, W Wang, B Shen - Cellular Oncology, 2023 - Springer
Purpose Pancreatic adenocarcinoma (PAAD) remains a highly aggressive gastrointestinal
malignancy with a dismal prognosis. Pyroptosis has a key role in tumor development. Long …

[HTML][HTML] Breaking paradigms: Long non-coding RNAs forming gene fusions with potential implications in cancer

D Sánchez-Marín, MB Silva-Cázares, FI Porras-Reyes… - Genes & …, 2024 - Elsevier
Long non-coding RNAs (lncRNAs) are non-coding RNAs longer than 200 nucleotides with
dynamic regulatory functions. They interact with a wide range of molecules such as DNA …

LncRNA FOXP4-AS1 promotes progression of ewing sarcoma and is associated with immune infiltrates

J Xiong, L Wu, L Huang, C Wu, Z Liu, W Deng… - Frontiers in …, 2021 - frontiersin.org
Ewing sarcoma (ES) is a highly malignant primary bone tumor with poor prognosis. Studies
have shown that abnormal expression of lncRNA influences the prognosis of tumor patients …

Plasma circulating microRNAs associated with blood-based immune markers: a population-based study

S Leonard, I Karabegović, MA Ikram… - Clinical and …, 2024 - academic.oup.com
MicroRNAs (miRNAs) are small non-coding RNAs that post-transcriptionally regulate gene
expression and different immune-related pathways. There is a great interest in identifying …

[HTML][HTML] Novel model of pyroptosis-related molecular signatures for prognosis prediction of clear cell renal cell carcinoma patients

J Chen, R Jiang, W Guan, Q Cao, Y Tian… - … Journal of Medical …, 2024 - ncbi.nlm.nih.gov
Background: Pyroptosis is a programmed death mode of inflammatory cells, which is closely
related to tumor progression and tumor immunity. Clear cell renal cell carcinoma (ccRCC) is …

Conserved features and diversity attributes of chimeric RNAs across accessions in four plants

J Cong, S Zhang, Q Zhang, X Yu… - Plant Biotechnology …, 2024 - Wiley Online Library
As a non‐collinear expression form of genetic information, chimeric RNAs increase the
complexity of transcriptome in diverse organisms. Although chimeric RNAs have been …

mRNA capture sequencing and RT-qPCR for the detection of pathognomonic, novel, and secondary fusion transcripts in FFPE tissue: a sarcoma showcase

A Decock, D Creytens, S Lefever… - International Journal of …, 2022 - mdpi.com
We assess the performance of mRNA capture sequencing to identify fusion transcripts in
FFPE tissue of different sarcoma types, followed by RT-qPCR confirmation. To validate our …

Circadian rhythm-associated lncRNA RP11-414H17. 5 as a key therapeutic target in osteosarcoma affects the tumor immune microenvironment and enhances …

L Huang, W Liang, W Cai, H Peng - Journal of Orthopaedic Surgery and …, 2023 - Springer
Background It has previously been proven that circadian rhythm disruption is associated
with the incidence and deterioration of several tumors, which potentially leads to increased …