Microbial and animal rhodopsins: structures, functions, and molecular mechanisms

OP Ernst, DT Lodowski, M Elstner, P Hegemann… - Chemical …, 2014 - ACS Publications
Organisms of all domains of life use photoreceptor proteins to sense and respond to light.
The light-sensitivity of photoreceptor proteins arises from bound chromophores such as …

Infrared difference spectroscopy of proteins: from bands to bonds

VA Lorenz-Fonfria - Chemical reviews, 2020 - ACS Publications
Infrared difference spectroscopy probes vibrational changes of proteins upon their
perturbation. Compared with other spectroscopic methods, it stands out by its sensitivity to …

Bacteriorhodopsin

JK Lanyi - Annu. Rev. Physiol., 2004 - annualreviews.org
▪ Abstract Fourier transform infrared and Raman spectroscopy, solid-state NMR, and X-ray
crystallography have contributed detailed information about the structural changes in the …

Structural asymmetry of AcrB trimer suggests a peristaltic pump mechanism

MA Seeger, A Schiefner, T Eicher, F Verrey… - Science, 2006 - science.org
The AcrA/AcrB/TolC complex spans the inner and outer membranes of Escherichia coli and
serves as its major drug-resistance pump. Driven by the proton motive force, it mediates the …

[HTML][HTML] Proton transfers in the bacteriorhodopsin photocycle

JK Lanyi - Biochimica et Biophysica Acta (BBA)-Bioenergetics, 2006 - Elsevier
The steps in the mechanism of proton transport in bacteriorhodopsin include examples for
most kinds of proton transfer reactions that might occur in a transmembrane pump: proton …

Molecular mechanism of H+ conduction in the single-file water chain of the gramicidin channel

R Pomes, B Roux - Biophysical journal, 2002 - cell.com
The conduction of protons in the hydrogen-bonded chain of water molecules (or" proton
wire") embedded in the lumen of gramicidin A is studied with molecular dynamics free …

[HTML][HTML] Bacteriorhodopsin: a high-resolution structural view of vectorial proton transport

R Neutze, E Pebay-Peyroula, K Edman… - … et Biophysica Acta (BBA …, 2002 - Elsevier
Recent 3-D structures of several intermediates in the photocycle of bacteriorhodopsin (bR)
provide a detailed structural picture of this molecular proton pump in action. In this review …

Ion-pumping microbial rhodopsins

H Kandori - Frontiers in molecular biosciences, 2015 - frontiersin.org
Rhodopsins are light-sensing proteins used in optogenetics. The word “rhodopsin”
originates from the Greek words “rhodo” and “opsis,” indicating rose and sight, respectively …

Crystallographic structure of the K intermediate of bacteriorhodopsin: conservation of free energy after photoisomerization of the retinal

B Schobert, J Cupp-Vickery, V Hornak, SO Smith… - Journal of molecular …, 2002 - Elsevier
The K state, an early intermediate of the bacteriorhodopsin photocycle, contains the excess
free energy used for light-driven proton transport. The energy gain must reside in or near the …

Rhodopsin: insights from recent structural studies

TP Sakmar, ST Menon, EP Marin… - Annual review of …, 2002 - annualreviews.org
▪ Abstract The recent report of the crystal structure of rhodopsin provides insights concerning
structure-activity relationships in visual pigments and related G protein–coupled receptors …