Unlocking the secret of lignin-enzyme interactions: Recent advances in developing state-of-the-art analytical techniques

X Zhao, X Meng, AJ Ragauskas, C Lai, Z Ling… - Biotechnology …, 2022 - Elsevier
Bioconversion of renewable lignocellulosics to produce liquid fuels and chemicals is one of
the most effective ways to solve the problem of fossil resource shortage, energy security, and …

[HTML][HTML] Stability of ligand-induced protein conformation influences affinity in maltose-binding protein

M van den Noort, M de Boer, B Poolman - Journal of molecular biology, 2021 - Elsevier
Our understanding of what determines ligand affinity of proteins is poor, even with high-
resolution structures available. Both the non-covalent ligand–protein interactions and the …

Production of phenylpyruvic acid by engineered l-amino acid deaminase from Proteus mirabilis

J Liu, J Liu, B Yang, C Gao, W Song, G Hu, L Liu… - Biotechnology …, 2022 - Springer
Objectives This study aimed to develop an efficient enzymatic strategy for the industrial
production of phenylpyruvate (PPA) from l-phenylpyruvic acid (l-Phe). Results l-amino acid …

High-throughput reconstruction of ancestral protein sequence, structure, and molecular function

K Aadland, C Pugh, B Kolaczkowski - Computational Methods in Protein …, 2019 - Springer
Ancestral protein sequence reconstruction is a powerful technique for explicitly testing
hypotheses about the evolution of molecular function, allowing researchers to meticulously …

Structural and biophysical characterization of the tandem substrate-binding domains of the ABC importer GlnPQ

E Ploetz, GK Schuurman-Wolters, N Zijlstra… - Open …, 2021 - royalsocietypublishing.org
The ATP-binding cassette transporter GlnPQ is an essential uptake system that transports
glutamine, glutamic acid and asparagine in Gram-positive bacteria. It features two extra …

[PDF][PDF] Computational modeling of cAMP-dependent protein kinase allostery

A Izvolski, A Kuznetsov - Proceedings of the Estonian Academy of Sciences, 2023 - kirj.ee
Allosteric regulation by ATP of peptide binding with a cAMP-dependent protein kinase
catalytic subunit was computationally modeled by combining conventional docking analysis …

Oriented Immobilization of G Protein-Coupled Receptors

X Zhao, Q Li, J Wang, Q Liang, J Quan - G Protein-Coupled Receptors …, 2023 - Springer
GPCR immobilization is fundamental for many bioanalytical methods, which are crucial for
receptor-ligand interaction analysis and drug discovery. A desirable way to immobilize …