Foodomics: A novel approach for food microbiology
YJ Xu - TrAC Trends in Analytical Chemistry, 2017 - Elsevier
Microorganisms exert both beneficial and deleterious effects on food stuff. Foodomics is a
new holistic approach that employs advanced omics technologies for the exploitation of food …
new holistic approach that employs advanced omics technologies for the exploitation of food …
An experimental phylogeny to benchmark ancestral sequence reconstruction
RN Randall, CE Radford, KA Roof… - Nature …, 2016 - nature.com
Ancestral sequence reconstruction (ASR) is a still-burgeoning method that has revealed
many key mechanisms of molecular evolution. One criticism of the approach is an inability to …
many key mechanisms of molecular evolution. One criticism of the approach is an inability to …
Comparative genomics on artificial life
Molecular evolutionary methods and tools are difficult to validate as we have almost no
direct access to ancient molecules. Inference methods may be tested with simulated data …
direct access to ancient molecules. Inference methods may be tested with simulated data …
Genome rearrangement shapes Prochlorococcus ecological adaptation
Prochlorococcus is the most abundant and smallest known free-living photosynthetic
microorganism and is a key player in marine ecosystems and biogeochemical cycles …
microorganism and is a key player in marine ecosystems and biogeochemical cycles …
Genome rearrangements and phylogeny reconstruction in Yersinia pestis
OO Bochkareva, NO Dranenko, ES Ocheredko… - PeerJ, 2018 - peerj.com
Genome rearrangements have played an important role in the evolution of Yersinia pestis
from its progenitor Yersinia pseudotuberculosis. Traditional phylogenetic trees for Y. pestis …
from its progenitor Yersinia pseudotuberculosis. Traditional phylogenetic trees for Y. pestis …
Dynamique des génomes bactériens: Une étude expérimentale in silico avec la plateforme Aevol
M Foley - 2023 - theses.hal.science
Aevol est une plate-forme de simulation de l'évolution de populations d'organismes par
variation et sélection. La conception du modèle est axée sur le réalisme de la structure du …
variation et sélection. La conception du modèle est axée sur le réalisme de la structure du …
Host-symbiont-gene phylogenetic reconciliation
H Menet, AN Trung, V Daubin… - Peer Community …, 2023 - peercommunityjournal.org
Motivation Biological systems are made of entities organized at different scales (eg macro-
organisms, symbionts, genes...) which evolve in interaction. These interactions range from …
organisms, symbionts, genes...) which evolve in interaction. These interactions range from …
[PDF][PDF] New methods for investigating past epidemics (Archaeology, Paleopathology, ancient DNA)
G Fornaciari - Epidémies et sociétés-passé, présent, futur, 2016 - academia.edu
The Basilica of San Domenico Maggiore, which dates back to the beginning of the 14th
century, is one of the largest and most important churches in Naples. The Sacristy of the …
century, is one of the largest and most important churches in Naples. The Sacristy of the …
[PDF][PDF] In silico experimental evolution provides independent and challenging benchmarks for comparative genomics
A common concern in all evolutionary studies is the validity of the methods and results.
Results relate to events that were supposed to occur in a deep past (up to 4 billion years) …
Results relate to events that were supposed to occur in a deep past (up to 4 billion years) …
[PDF][PDF] Toovercometheseproblems, weproposeanewmethodofdating, basedontheDNAsequence complementary to the molecular clock. Lateral gene transfer (LGT) is a …
A Davín - JOURNÉES OUVERTES DE BIOLOGIE … - jobim2016.sciencesconf.org
En métagénomique ciblée, une problématique récurrente concerne la quantité de lectures
réellement exploitables en sortie d'un séquenceur à haut débit. L'une des étapes influençant …
réellement exploitables en sortie d'un séquenceur à haut débit. L'une des étapes influençant …