Alternative splicing at the intersection of biological timing, development, and stress responses

D Staiger, JWS Brown - The Plant Cell, 2013 - academic.oup.com
High-throughput sequencing for transcript profiling in plants has revealed that alternative
splicing (AS) affects a much higher proportion of the transcriptome than was previously …

Does co-transcriptional regulation of alternative splicing mediate plant stress responses?

I Jabre, ASN Reddy, M Kalyna… - Nucleic Acids …, 2019 - academic.oup.com
Plants display exquisite control over gene expression to elicit appropriate responses under
normal and stress conditions. Alternative splicing (AS) of pre-mRNAs, a process that …

Interaction of light and temperature signalling

KA Franklin, G Toledo-Ortiz, DE Pyott… - … of experimental botany, 2014 - academic.oup.com
Light and temperature are arguably two of the most important signals regulating the growth
and development of plants. In addition to their direct energetic effects on plant growth, light …

Global transcriptome analysis reveals circadian control of splicing events in Arabidopsis thaliana

A Romanowski, RG Schlaen… - The Plant …, 2020 - Wiley Online Library
The circadian clock of Arabidopsis thaliana controls many physiological and molecular
processes, allowing plants to anticipate daily changes in their environment. However …

MAF2 Is Regulated by Temperature-Dependent Splicing and Represses Flowering at Low Temperatures in Parallel with FLM

CA Airoldi, M McKay, B Davies - PLoS One, 2015 - journals.plos.org
Plants enter their reproductive phase when the environmental conditions are favourable for
the successful production of progeny. The transition from vegetative to reproductive phase is …

Circadian rhythms and post-transcriptional regulation in higher plants

A Romanowski, MJ Yanovsky - Frontiers in plant science, 2015 - frontiersin.org
The circadian clock of plants allows them to cope with daily changes in their environment.
This is accomplished by the rhythmic regulation of gene expression, in a process that …

RNA-binding proteins revisited–the emerging Arabidopsis mRNA interactome

T Köster, C Marondedze, K Meyer, D Staiger - Trends in Plant Science, 2017 - cell.com
RNA–protein interaction is an important checkpoint to tune gene expression at the RNA
level. Global identification of proteins binding in vivo to mRNA has been possible through …

Role of alternative pre-mRNA splicing in temperature signaling

G Capovilla, A Pajoro, RGH Immink… - Current opinion in plant …, 2015 - Elsevier
Highlights•Alternative splicing (AS) acts as 'molecular thermometer'in plants.•Key flowering
time and circadian clock regulatory genes undergo temperature dependent AS.•Splicing …

What is going on inside of phytochrome B photobodies?

BC Willige, CY Yoo, JP Saldierna Guzmán - The Plant Cell, 2024 - academic.oup.com
Plants exhibit an enormous phenotypic plasticity to adjust to changing environmental
conditions. For this purpose, they have evolved mechanisms to detect and measure biotic …

Phytochrome A elevates plant circadian-clock components to suppress shade avoidance in deep-canopy shade

DP Fraser, PE Panter, A Sharma… - Proceedings of the …, 2021 - National Acad Sciences
Shade-avoiding plants can detect the presence of neighboring vegetation and evoke
escape responses before canopy cover limits photosynthesis. Rapid stem elongation …