Escherichia coli Pathobionts Associated with Inflammatory Bowel Disease

HC Mirsepasi-Lauridsen, BA Vallance… - Clinical microbiology …, 2019 - Am Soc Microbiol
Gut bacteria play a key role in initiating and maintaining the inflammatory process in the gut
tissues of inflammatory bowel disease (IBD) patients, by supplying antigens or other …

Analysing microbial community composition through amplicon sequencing: from sampling to hypothesis testing

LW Hugerth, AF Andersson - Frontiers in microbiology, 2017 - frontiersin.org
Microbial ecology as a scientific field is fundamentally driven by technological advance. The
past decade's revolution in DNA sequencing cost and throughput has made it possible for …

Global trends in antimicrobial resistance in animals in low-and middle-income countries

TP Van Boeckel, J Pires, R Silvester, C Zhao, J Song… - Science, 2019 - science.org
INTRODUCTION The global scale-up in demand for animal protein is the most notable
dietary trend of our time. Since 2000, meat production has plateaued in high-income …

Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy

JP Meier-Kolthoff, RL Hahnke, J Petersen… - Standards in genomic …, 2014 - Springer
Although Escherichia coli is the most widely studied bacterial model organism and often
considered to be the model bacterium per se, its type strain was until now forgotten from …

Biogeography of the oral microbiome: the site-specialist hypothesis

JL Mark Welch, FE Dewhirst… - Annual review of …, 2019 - annualreviews.org
Microbial communities are complex and dynamic, composed of hundreds of taxa interacting
across multiple spatial scales. Advances in sequencing and imaging technology have led to …

[HTML][HTML] Investigation of gut microbiome changes in type 1 diabetic mellitus rats based on high-throughput sequencing

Q Ma, Y Li, J Wang, P Li, Y Duan, H Dai, Y An… - Biomedicine & …, 2020 - Elsevier
The incidence of type 1 diabetes mellitus (T1DM) is increasing year by year, gut microbiota
is considered to be closely related to the occurrence and development of T1DM in recent …

[图书][B] Practical handbook of microbiology

LH Green, E Goldman - 2021 - books.google.com
Practical Handbook of Microbiology, 4th edition provides basic, clear and concise
knowledge and practical information about working with microorganisms. Useful to anyone …

CVTree3 web server for whole-genome-based and alignment-free prokaryotic phylogeny and taxonomy

G Zuo, B Hao - Genomics, Proteomics and Bioinformatics, 2015 - academic.oup.com
A faithful phylogeny and an objective taxonomy for prokaryotes should agree with each
other and ultimately follow the genome data. With the number of sequenced genomes …

The Intriguing Evolutionary Journey of Enteroinvasive E. coli (EIEC) toward Pathogenicity

M Pasqua, V Michelacci, ML Di Martino… - Frontiers in …, 2017 - frontiersin.org
Among the intestinal pathogenic Escherichia coli, enteroinvasive E. coli (EIEC) are a group
of intracellular pathogens able to enter epithelial cells of colon, multiplicate within them, and …

On the track for an efficient detection of Escherichia coli in water: A review on PCR-based methods

DM Silva, L Domingues - Ecotoxicology and Environmental Safety, 2015 - Elsevier
Ensuring water safety is an ongoing challenge to public health providers. Assessing the
presence of fecal contamination indicators in water is essential to protect public health from …