Recent advances in quantitative neuroproteomics

GE Craft, A Chen, AC Nairn - Methods, 2013 - Elsevier
The field of proteomics is undergoing rapid development in a number of different areas
including improvements in mass spectrometric platforms, peptide identification algorithms …

Chromogranin A and derived peptides in health and disease

YP Loh, Y Cheng, SK Mahata, A Corti… - Journal of Molecular …, 2012 - Springer
Chromogranin A (CgA) is a member of the granins, a family of acidic proteins found in
abundance in (neuro) endocrine cells (eg, in chromaffin cells) and in some tumors. Like …

The spectral networks paradigm in high throughput mass spectrometry

A Guthals, JD Watrous, PC Dorrestein… - Molecular …, 2012 - pubs.rsc.org
High-throughput proteomics is made possible by a combination of modern mass
spectrometry instruments capable of generating many millions of tandem mass (MS2) …

[HTML][HTML] Secretome analysis: Reading cellular sign language to understand intercellular communication

W Wu, J Krijgsveld - Molecular & Cellular Proteomics, 2024 - ASBMB
A significant portion of mammalian proteomes is secreted to the extracellular space to fulfill
crucial roles in cell-to-cell communication. To best recapitulate the intricate and multi-faceted …

NeuroPedia: neuropeptide database and spectral library

Y Kim, S Bark, V Hook, N Bandeira - Bioinformatics, 2011 - academic.oup.com
Neuropeptides are essential for cell–cell communication in neurological and endocrine
physiological processes in health and disease. While many neuropeptides have been …

Diversity of neuropeptide cell-cell signaling molecules generated by proteolytic processing revealed by neuropeptidomics mass spectrometry

V Hook, CB Lietz, S Podvin, T Cajka… - Journal of the American …, 2018 - ACS Publications
Neuropeptides are short peptides in the range of 3–40 residues that are secreted for cell-cell
communication in neuroendocrine systems. In the nervous system, neuropeptides comprise …

[HTML][HTML] The novel chromogranin A-derived serpinin and pyroglutaminated serpinin peptides are positive cardiac β-adrenergic-like inotropes

B Tota, S Gentile, T Pasqua, E Bassino… - The FASEB …, 2012 - ncbi.nlm.nih.gov
Three forms of serpinin peptides, serpinin (Ala26Leu), pyroglutaminated (pGlu)-serpinin
(pGlu23Leu), and serpinin-Arg-Arg-Gly (Ala29Gly), are derived from cleavage at pairs of …

Developmental gene regulation by an ancient intercellular communication system in social amoebae

A Asghar, M Groth, O Siol, F Gaube, C Enzensperger… - Protist, 2012 - Elsevier
The social amoebae (Dictyostelia) use quorum sensing-like communication systems to
coordinate the periodic transition from uni-to multicellularity. The monophyletic descent of …

Evaluation of database search programs for accurate detection of neuropeptides in tandem mass spectrometry experiments

MN Akhtar, BR Southey, PE Andrén… - Journal of Proteome …, 2012 - ACS Publications
Neuropeptide identification in mass spectrometry experiments using database search
programs developed for proteins is challenging. Unlike proteins, the detection of the …

Phosphopeptidomics reveals differential phosphorylation states and novel SxE phosphosite motifs of neuropeptides in dense core secretory vesicles

CB Lietz, T Toneff, C Mosier, S Podvin… - Journal of The …, 2018 - ACS Publications
Neuropeptides are vital for cell-cell communication and function in the regulation of the
nervous and endocrine systems. They are generated by post-translational modification …