Diverse mechanisms of BRAF inhibitor resistance in melanoma identified in clinical and preclinical studies

SA Luebker, SA Koepsell - Frontiers in oncology, 2019 - frontiersin.org
BRAF inhibitor therapy may provide profound initial tumor regression in metastatic
melanoma with BRAF V600 mutations, but treatment resistance often leads to disease …

Modeling clear cell renal cell carcinoma and therapeutic implications

MM Wolf, W Kimryn Rathmell, KE Beckermann - Oncogene, 2020 - nature.com
Renal cell carcinoma (RCC) comprises a diverse group of malignancies arising from the
nephron. The most prevalent type, clear cell renal cell carcinoma (ccRCC), is characterized …

[HTML][HTML] Global computational alignment of tumor and cell line transcriptional profiles

A Warren, Y Chen, A Jones, T Shibue, WC Hahn… - Nature …, 2021 - nature.com
Cell lines are key tools for preclinical cancer research, but it remains unclear how well they
represent patient tumor samples. Direct comparisons of tumor and cell line transcriptional …

Anticancer potential of natural chalcones: in vitro and in vivo evidence

R Michalkova, L Mirossay, M Kello… - International Journal of …, 2023 - mdpi.com
There is no doubt that significant progress has been made in tumor therapy in the past
decades. However, the discovery of new molecules with potential antitumor properties still …

Knockdown of SETD2 promotes erastin-induced ferroptosis in ccRCC

W Xue, W Jian, Y Meng, T Wang, L Cai, Y Yu… - Cell Death & …, 2023 - nature.com
Clear cell renal cell carcinoma (ccRCC) is the most common subtype of kidney cancer and is
associated with poor prognosis. The histone H3 lysine 36 methyltransferase SET-domain …

A novel molecular signature identifies mixed subtypes in renal cell carcinoma with poor prognosis and independent response to immunotherapy

FA Büttner, S Winter, V Stühler, S Rausch… - Genome Medicine, 2022 - Springer
Background Renal cell carcinoma (RCC) is a heterogeneous disease comprising
histologically defined subtypes. For therapy selection, precise subtype identification and …

A network of human functional gene interactions from knockout fitness screens in cancer cells

E Kim, M Dede, WF Lenoir, G Wang… - Life science …, 2019 - life-science-alliance.org
Genetic interactions mediate the emergence of phenotype from genotype. The systematic
survey of genetic interactions in yeast showed that genes operating in the same biological …

Computational estimation of quality and clinical relevance of cancer cell lines

L Trastulla, J Noorbakhsh, F Vazquez… - Molecular Systems …, 2022 - embopress.org
Immortal cancer cell lines (CCLs) are the most widely used system for investigating cancer
biology and for the preclinical development of oncology therapies. Pharmacogenomic and …

Matching cell lines with cancer type and subtype of origin via mutational, epigenomic, and transcriptomic patterns

M Salvadores, F Fuster-Tormo, F Supek - Science Advances, 2020 - science.org
Cell lines are commonly used as cancer models. The tissue of origin provides context for
understanding biological mechanisms and predicting therapy response. We therefore …

The effect of mesenchymal stem cells-derived exosomes on the prostate, bladder, and renal cancer cell lines

AR Rezaeian, F Khatami, S Heidari Keshel… - Scientific Reports, 2022 - nature.com
We aimed to explain the role of mesenchymal stem cells (MSC-exosomes) on gene
expressions of epithelial to mesenchymal transition (EMT), angiogenesis, and apoptosis …