The construction of evolutionary trees is now a standard part of exploratory sequence
analysis. Bayesian methods for estimating trees have recently been proposed as a faster …

▪ Abstract The number, size, and scope of phylogenetic analyses using molecular data has
increased steadily in recent years. This has simultaneously led to a dramatic improvement in …

Large phylogenomics data sets require fast tree inference methods, especially for maximum-
likelihood (ML) phylogenies. Fast programs exist, but due to inherent heuristics to find …

The increase in the number of large data sets and the complexity of current probabilistic
sequence evolution models necessitates fast and reliable phylogeny reconstruction …

Evolutionary biologists have adopted simple likelihood models for purposes of estimating
ancestral states and evaluating character independence on specified phylogenies; however …

The field of molecular evolution has experienced explosive growth in recent years due to the
rapid accumulation of genetic sequence data, continuous improvements to computer …

Motivation: The computation of large phylogenetic trees with statistical models such as
maximum likelihood or bayesian inference is computationally extremely intensive. It has …

PHYML Online is a web interface to PHYML, a software that implements a fast and accurate
heuristic for estimating maximum likelihood phylogenies from DNA and protein sequences …

Background Most analysis programs for inferring molecular phylogenies are difficult to use,
in particular for researchers with little programming experience. Results TREEFINDER is an …

Studies of evolution at the molecular level have experienced phenomenal growth in the last
few decades, due to rapid accumulation of genetic sequence data, improved computer …