Long non-coding RNAs: definitions, functions, challenges and recommendations

JS Mattick, PP Amaral, P Carninci… - … reviews Molecular cell …, 2023 - nature.com
Genes specifying long non-coding RNAs (lncRNAs) occupy a large fraction of the genomes
of complex organisms. The term 'lncRNAs' encompasses RNA polymerase I (Pol I), Pol II …

[HTML][HTML] Exploring the expanding universe of small RNAs

J Shi, T Zhou, Q Chen - Nature cell biology, 2022 - nature.com
The world of small noncoding RNAs (sncRNAs) is ever-expanding, from small interfering
RNA, microRNA and Piwi-interacting RNA to the recently emerging non-canonical sncRNAs …

Meta-analysis of tRNA derived RNA fragments reveals that they are evolutionarily conserved and associate with AGO proteins to recognize specific RNA targets

P Kumar, J Anaya, SB Mudunuri, A Dutta - BMC biology, 2014 - Springer
Background tRFs, 14 to 32 nt long single-stranded RNA derived from mature or precursor
tRNAs, are a recently discovered class of small RNA that have been found to be present in …

Functional interactions among microRNAs and long noncoding RNAs

JH Yoon, K Abdelmohsen, M Gorospe - Seminars in cell & developmental …, 2014 - Elsevier
In mammals, the vast majority of transcripts expressed are noncoding RNAs, ranging from
short RNAs (including microRNAs) to long RNAs spanning up to hundreds of kb. While the …

Long non-coding RNA linc00673 regulated non-small cell lung cancer proliferation, migration, invasion and epithelial mesenchymal transition by sponging miR-150 …

W Lu, H Zhang, Y Niu, Y Wu, W Sun, H Li, J Kong… - Molecular cancer, 2017 - Springer
Background The function of a new long non-coding RNA linc00673 remains unclear. While
identified as an oncogenic player in non-small cell lung cancer (NSCLC), linc00673 was …

Biogenesis and function of transfer RNA-related fragments (tRFs)

P Kumar, C Kuscu, A Dutta - Trends in biochemical sciences, 2016 - cell.com
Noncoding small RNAs arise from the various un-annotated and annotated regions of the
genome. When they arise from annotated genes, the noncoding small RNAs are functionally …

[HTML][HTML] tRNA fragments in human health and disease

P Anderson, P Ivanov - FEBS letters, 2014 - Elsevier
Transfer RNA (tRNA) is traditionally considered to be an adaptor molecule that helps
ribosomes to decode messenger RNA (mRNA) and synthesize protein. Recent studies have …

LncRNA SNHG7 sponges miR-216b to promote proliferation and liver metastasis of colorectal cancer through upregulating GALNT1

Y Shan, J Ma, Y Pan, J Hu, B Liu, L Jia - Cell death & disease, 2018 - nature.com
Accumulating evidence suggests long noncoding RNAs (lncRNAs) play an important role in
cancer progression. However, the function of lncRNA SNHG7 in colorectal cancer (CRC) …

[HTML][HTML] Cytoplasmic RNA decay pathways-Enzymes and mechanisms

A Łabno, R Tomecki, A Dziembowski - Biochimica et Biophysica Acta (BBA) …, 2016 - Elsevier
RNA decay plays a crucial role in post-transcriptional regulation of gene expression. Work
conducted over the last decades has defined the major mRNA decay pathways, as well as …

Long non-coding RNA (lncRNA) roles in cell biology, neurodevelopment and neurological disorders

V Aliperti, J Skonieczna, A Cerase - Non-coding RNA, 2021 - mdpi.com
Development is a complex process regulated both by genetic and epigenetic and
environmental clues. Recently, long non-coding RNAs (lncRNAs) have emerged as key …