cis-Regulatory Elements in Plant Development, Adaptation, and Evolution

AP Marand, AL Eveland, K Kaufmann… - Annual review of …, 2023 - annualreviews.org
cis-Regulatory elements encode the genomic blueprints that ensure the proper
spatiotemporal patterning of gene expression necessary for appropriate development and …

microRNAs and their roles in plant development

Q Dong, B Hu, C Zhang - Frontiers in plant science, 2022 - frontiersin.org
Small RNAs are short non-coding RNAs with a length ranging between 20 and 24
nucleotides. Of these, microRNAs (miRNAs) play a distinct role in plant development …

A cis-regulatory atlas in maize at single-cell resolution

AP Marand, Z Chen, A Gallavotti, RJ Schmitz - Cell, 2021 - cell.com
Summary cis-regulatory elements (CREs) encode the genomic blueprints of spatiotemporal
gene expression programs enabling highly specialized cell functions. Using single-cell …

[HTML][HTML] Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery

X Xu, M Crow, BR Rice, F Li, B Harris, L Liu… - Developmental Cell, 2021 - cell.com
Crop productivity depends on activity of meristems that produce optimized plant
architectures, including that of the maize ear. A comprehensive understanding of …

Integration of high-throughput phenotyping, GWAS, and predictive models reveals the genetic architecture of plant height in maize

W Wang, W Guo, L Le, J Yu, Y Wu, D Li, Y Wang… - Molecular Plant, 2023 - cell.com
Plant height (PH) is an essential trait in maize (Zea mays) that is tightly associated with
planting density, biomass, lodging resistance, and grain yield in the field. Dissecting the …

Development of a haploid-inducer mediated genome editing system for accelerating maize breeding

B Wang, L Zhu, B Zhao, Y Zhao, Y Xie, Z Zheng, Y Li… - Molecular plant, 2019 - cell.com
Crop breeding aims to generate pure inbred lines with multiple desired traits. Doubled
haploid (DH) and genome editing using CRISPR/Cas9 are two powerful game-changing …

CRISPR/Cas9-mediated targeted mutagenesis of GmSPL9 genes alters plant architecture in soybean

A Bao, H Chen, L Chen, S Chen, Q Hao, W Guo… - BMC plant biology, 2019 - Springer
Background The plant architecture has significant effects on grain yield of various crops,
including soybean (Glycine max), but the knowledge on optimization of plant architecture in …

Coordinated regulation of vegetative and reproductive branching in rice

L Wang, S Sun, J Jin, D Fu, X Yang… - Proceedings of the …, 2015 - National Acad Sciences
Grasses produce tiller and panicle branching at vegetative and reproductive stages; the
branching patterns largely define the diversity of grasses and constitute a major determinant …

Phytochrome-interacting factors directly suppress MIR156 expression to enhance shade-avoidance syndrome in Arabidopsis

Y Xie, Y Liu, H Wang, X Ma, B Wang, G Wu… - Nature …, 2017 - nature.com
Plants have evolved a repertoire of strategies collectively termed the shade-avoidance
syndrome to avoid shade from canopy and compete for light with their neighbors. However …

A serine/threonine protein kinase encoding gene KERNEL NUMBER PER ROW6 regulates maize grain yield

H Jia, M Li, W Li, L Liu, Y Jian, Z Yang, X Shen… - Nature …, 2020 - nature.com
Increasing grain yield of maize (Zea mays L.) is required to meet the rapidly expanding
demands for maize-derived food, feed, and fuel. Breeders have enhanced grain productivity …