Protocells and RNA self-replication
GF Joyce, JW Szostak - Cold Spring Harbor Perspectives …, 2018 - cshperspectives.cshlp.org
The general notion of an “RNA world” is that, in the early development of life on the Earth,
genetic continuity was assured by the replication of RNA, and RNA molecules were the chief …
genetic continuity was assured by the replication of RNA, and RNA molecules were the chief …
The origins of the RNA world
MP Robertson, GF Joyce - Cold Spring Harbor …, 2012 - cshperspectives.cshlp.org
The general notion of an “RNA World” is that, in the early development of life on the Earth,
genetic continuity was assured by the replication of RNA and genetically encoded proteins …
genetic continuity was assured by the replication of RNA and genetically encoded proteins …
Cryo-EM structures of full-length Tetrahymena ribozyme at 3.1 Å resolution
Single-particle cryogenic electron microscopy (cryo-EM) has become a standard technique
for determining protein structures at atomic resolution,–. However, cryo-EM studies of protein …
for determining protein structures at atomic resolution,–. However, cryo-EM studies of protein …
RNA catalyses nuclear pre-mRNA splicing
SM Fica, N Tuttle, T Novak, NS Li, J Lu, P Koodathingal… - Nature, 2013 - nature.com
In nuclear pre-messenger RNA splicing, introns are excised by the spliceosome, a dynamic
machine composed of both proteins and small nuclear RNAs (snRNAs). Over thirty years …
machine composed of both proteins and small nuclear RNAs (snRNAs). Over thirty years …
Biological phosphoryl-transfer reactions: understanding mechanism and catalysis
JK Lassila, JG Zalatan… - Annual review of …, 2011 - annualreviews.org
Phosphoryl-transfer reactions are central to biology. These reactions also have some of the
slowest nonenzymatic rates and thus require enormous rate accelerations from biological …
slowest nonenzymatic rates and thus require enormous rate accelerations from biological …
Watching DNA polymerase η make a phosphodiester bond
T Nakamura, Y Zhao, Y Yamagata, Y Hua, W Yang - Nature, 2012 - nature.com
DNA synthesis has been extensively studied, but the chemical reaction itself has not been
visualized. Here we follow the course of phosphodiester bond formation using time-resolved …
visualized. Here we follow the course of phosphodiester bond formation using time-resolved …
Metal ions in the structure and function of RNA
A Pyle - JBIC Journal of Biological Inorganic Chemistry, 2002 - Springer
It is becoming increasingly clear that RNA is more than a passive carrier of genetic
information. Folded RNA molecules play key roles in almost every aspect of cellular …
information. Folded RNA molecules play key roles in almost every aspect of cellular …
Crystal structure of a self-splicing group I intron with both exons
PL Adams, MR Stahley, AB Kosek, J Wang, SA Strobel - Nature, 2004 - nature.com
The discovery of the RNA self-splicing group I intron provided the first demonstration that not
all enzymes are proteins. Here we report the X-ray crystal structure (3.1-Å resolution) of a …
all enzymes are proteins. Here we report the X-ray crystal structure (3.1-Å resolution) of a …
General acid-base catalysis in the mechanism of a hepatitis delta virus ribozyme
S Nakano, DM Chadalavada, PC Bevilacqua - Science, 2000 - science.org
Many protein enzymes use general acid-base catalysis as a way to increase reaction rates.
The amino acid histidine is optimized for this function because it has ap K a (where K a is the …
The amino acid histidine is optimized for this function because it has ap K a (where K a is the …
The catalytic diversity of RNAs
MJ Fedor, JR Williamson - Nature reviews Molecular cell biology, 2005 - nature.com
The natural RNA enzymes catalyse phosphate-group transfer and peptide-bond formation.
Initially, metal ions were proposed to supply the chemical versatility that nucleotides lack. In …
Initially, metal ions were proposed to supply the chemical versatility that nucleotides lack. In …