Exploring the expanding universe of small RNAs

J Shi, T Zhou, Q Chen - Nature cell biology, 2022 - nature.com
The world of small noncoding RNAs (sncRNAs) is ever-expanding, from small interfering
RNA, microRNA and Piwi-interacting RNA to the recently emerging non-canonical sncRNAs …

[HTML][HTML] Challenges and emerging trends in liquid chromatography-based analyses of mRNA pharmaceuticals

S Fekete, C Doneanu, B Addepalli, M Gaye… - … of Pharmaceutical and …, 2023 - Elsevier
Lipid encapsulated messenger RNA (LNP mRNA) has garnered a significant amount of
interest from the pharmaceutical industry and general public alike. This attention has been …

tRNA-mediated codon-biased translation in mycobacterial hypoxic persistence

YH Chionh, M McBee, IR Babu, F Hia, W Lin… - Nature …, 2016 - nature.com
Microbial pathogens adapt to the stress of infection by regulating transcription, translation
and protein modification. We report that changes in gene expression in hypoxia-induced …

Mass spectrometry of modified RNAs: recent developments

C Wetzel, PA Limbach - Analyst, 2016 - pubs.rsc.org
A common feature of ribonucleic acids (RNAs) is that they can undergo a variety of chemical
modifications. As nearly all of these chemical modifications result in an increase in the mass …

Hydrophilic interaction liquid chromatography with mass spectrometry for the separation and identification of antisense oligonucleotides impurities and nusinersen …

Z Vosáhlová, K Kalíková, M Gilar, J Szymarek… - … of Chromatography A, 2024 - Elsevier
With the development of therapeutic oligonucleotides for antisense and gene therapies, the
demand for analytical methods also increases. For the analysis of complex samples, for …

Detection of ribonucleoside modifications by liquid chromatography coupled with mass spectrometry

M Jora, PA Lobue, RL Ross, B Williams… - Biochimica et Biophysica …, 2019 - Elsevier
A small set of ribonucleoside modifications have been found in different regions of mRNA
including the open reading frame. Accurate detection of these specific modifications is …

Sequence mapping of transfer RNA chemical modifications by liquid chromatography tandem mass spectrometry

R Ross, X Cao, N Yu, PA Limbach - Methods, 2016 - Elsevier
Mass spectrometry is a powerful analytical tool for identifying and characterizing structural
modifications to the four canonical bases in RNA, information that is lost when using …

Instrumental analysis of RNA modifications

Y Yoluç, G Ammann, P Barraud, M Jora… - Critical Reviews in …, 2021 - Taylor & Francis
Organisms from all domains of life invest a substantial amount of energy for the introduction
of RNA modifications into nearly all transcripts studied to date. Instrumental analysis of RNA …

Bioengineering of noncoding RNAs for research agents and therapeutics

PY Ho, AM Yu - Wiley Interdisciplinary Reviews: RNA, 2016 - Wiley Online Library
The discovery of functional small noncoding RNAs (ncRNAs), such as microRNAs and small
interfering RNAs, in the control of human cellular processes has opened new avenues to …

Going global: the new era of mapping modifications in RNA

PA Limbach, MJ Paulines - Wiley Interdisciplinary Reviews …, 2017 - Wiley Online Library
The post‐transcriptional modification of RNA by the addition of one or more chemical groups
has been known for over 50 years. These chemical modifications, once thought to be static …