Highly Sensitive EGFRvIII Detection in Circulating Extracellular Vesicle RNA of Glioma Patients
Purpose: Liquid biopsy offers an attractive platform for noninvasive tumor diagnosis,
prognostication, and prediction of glioblastoma clinical outcomes. Prior studies report that …
prognostication, and prediction of glioblastoma clinical outcomes. Prior studies report that …
Inconsistent patterns of microbial diversity and composition between highly similar sequencing protocols: a case study with reef-building corals
16S rRNA gene profiling (amplicon sequencing) is a popular technique for understanding
host-associated and environmental microbial communities. Most protocols for sequencing …
host-associated and environmental microbial communities. Most protocols for sequencing …
The impact of RNA secondary structure on read start locations on the Illumina sequencing platform
A Price, J Garhyan, C Gibas - PLoS One, 2017 - journals.plos.org
High-throughput sequencing is subject to sequence dependent bias, which must be
accounted for if researchers are to make precise measurements and draw accurate …
accounted for if researchers are to make precise measurements and draw accurate …
Modeling classic attenuation regulation of gene expression in bacteria
VA Lyubetsky, SA Pirogov, LI Rubanov… - … of Bioinformatics and …, 2007 - World Scientific
A model is proposed primarily for the classical RNA attenuation regulation of gene
expression through premature transcription termination. The model is based on the concept …
expression through premature transcription termination. The model is based on the concept …
On the processing of metabolic information through metabolite–gene communication networks: An approach for modelling causality
Gene-metabolite correlation networks of three independent biological systems were
interrogated using an approach to define, and subsequently model, causality. The major …
interrogated using an approach to define, and subsequently model, causality. The major …
RNAmodel Web Server: Modeling classic attenuation in bacteria
L Rubanov, V Lyubetsky - In silico biology, 2007 - content.iospress.com
RNAmodel web server was recently established at the IITP RAS to implement our previously
proposed model of the classic attenuation regulation of gene expression in bacteria. This …
proposed model of the classic attenuation regulation of gene expression in bacteria. This …
[PDF][PDF] Statement of translational relevance
SM Batool, K Muralidharan, T Hsia, S Falotico… - academia.edu
Purpose Liquid biopsy offers an attractive platform for non-invasive tumor diagnosis,
prognostication and prediction of glioblastoma clinical outcomes. Prior studies report that 30 …
prognostication and prediction of glioblastoma clinical outcomes. Prior studies report that 30 …
Attenuation regulation as a term rewriting system
The classical attenuation regulation of gene expression in bacteria is considered. We
propose to represent the secondary RNA structure in the leader region of a gene or an …
propose to represent the secondary RNA structure in the leader region of a gene or an …
Highly Sensitive EGFRvIII Detection
Provided herein are methods for the detection of EGFRvIII mutation in patient samples, eg, in
tumor tissue, cerebrospinal fluid, and plasma samples, using an optimized ddPCR assay …
tumor tissue, cerebrospinal fluid, and plasma samples, using an optimized ddPCR assay …
[PDF][PDF] Investigating hybridization kinetics of oligos binding to DNA secondary structures
O Zou - 2019 - scholarworks.brandeis.edu
RNAs are molecules that rely on their 3D structure to regulate cell processes, such as
delivering molecules or making proteins. Therefore, disrupting the structure of RNA could …
delivering molecules or making proteins. Therefore, disrupting the structure of RNA could …