Bacterial transformation: distribution, shared mechanisms and divergent control

C Johnston, B Martin, G Fichant, P Polard… - Nature Reviews …, 2014 - nature.com
Natural bacterial transformation involves the internalization and chromosomal integration of
DNA and has now been documented in∼ 80 species. Recent advances have established …

Mechanisms of DNA uptake by naturally competent bacteria

D Dubnau, M Blokesch - Annual review of genetics, 2019 - annualreviews.org
Transformation is a widespread mechanism of horizontal gene transfer in bacteria. DNA
uptake to the periplasmic compartment requires a DNA-uptake pilus and the DNA-binding …

Biosynthesis and function of modified bases in bacteria and their viruses

P Weigele, EA Raleigh - Chemical reviews, 2016 - ACS Publications
Naturally occurring modification of the canonical A, G, C, and T bases can be found in the
DNA of cellular organisms and viruses from all domains of life. Bacterial viruses …

Interactions in the microbiome: communities of organisms and communities of genes

E Boon, CJ Meehan, C Whidden… - FEMS microbiology …, 2014 - academic.oup.com
A central challenge in microbial community ecology is the delineation of appropriate units of
biodiversity, which can be taxonomic, phylogenetic, or functional in nature. The term …

A random six-phase switch regulates pneumococcal virulence via global epigenetic changes

AS Manso, MH Chai, JM Atack, L Furi… - Nature …, 2014 - nature.com
Streptococcus pneumoniae (the pneumococcus) is the world's foremost bacterial pathogen
in both morbidity and mortality. Switching between phenotypic forms (or 'phases') that favour …

Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification

LM Iyer, D Zhang, L Aravind - Bioessays, 2016 - Wiley Online Library
While N6‐methyladenosine (m6A) is a well‐known epigenetic modification in bacterial DNA,
it remained largely unstudied in eukaryotes. Recent studies have brought to fore its potential …

Diversification of bacterial genome content through distinct mechanisms over different timescales

NJ Croucher, PG Coupland, AE Stevenson… - Nature …, 2014 - nature.com
Bacterial populations often consist of multiple co-circulating lineages. Determining how such
population structures arise requires understanding what drives bacterial diversification …

Horizontal DNA transfer mechanisms of bacteria as weapons of intragenomic conflict

NJ Croucher, R Mostowy, C Wymant, P Turner… - PLoS …, 2016 - journals.plos.org
Horizontal DNA transfer (HDT) is a pervasive mechanism of diversification in many microbial
species, but its primary evolutionary role remains controversial. Much recent research has …

Evolutionary ecology and interplay of prokaryotic innate and adaptive immune systems

T Dimitriu, MD Szczelkun, ER Westra - Current Biology, 2020 - cell.com
Like many organisms, bacteria and archaea have both innate and adaptive immune systems
to defend against infection by viruses and other parasites. Innate immunity most commonly …

Competence in Streptococcus pneumoniae and Close Commensal Relatives: Mechanisms and Implications

G Salvadori, R Junges, DA Morrison… - Frontiers in cellular and …, 2019 - frontiersin.org
The mitis group of streptococci comprises species that are common colonizers of the naso-
oral-pharyngeal tract of humans. Streptococcus pneumoniae and Streptococcus mitis are …